RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ZNF750Q32MQ0 723 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 B3GNTL1Q67FW5 361 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 HEPHL1Q6MZM0 1159 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SHQ1Q6PI26 577 aaKnown RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 GALNT4Q8N4A0 578 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 MARVELD2Q8N4S9 558 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 Q8NA96 180 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 OR7G2Q8NG99 324 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 PROX1Q92786 737 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 TMBIM1Q969X1 311 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 TAMM41Q96BW9 452 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 ZNF570Q96NI8 536 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 PTCHD1Q96NR3 888 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 OR7D2Q96RA2 312 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 EPYCQ99645 322 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 TREX2Q9BQ50 279 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 PIGUQ9H490 435 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 FAM32AQ9Y421 112 aaKnown RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 IGKV3D-11A0A0A0MRZ8 115 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SAC3D1A6NKF1 404 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 A8MVJ9 347 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 H0YAE9 185 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 DYRK3O43781 588 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 LDB3O75112 727 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 E2F6O75461 281 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 ALOX5P09917 674 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 FPR1P21462 350 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 STT3AP46977 705 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 CRYBA2P53672 197 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 MLLT10P55197 1068 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SMIM11AP58511 58 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 HPCAP84074 193 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 KLRB1Q12918 225 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 DAG1Q14118 895 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 PLEKHN1Q494U1 663 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 EXOSC6Q5RKV6 272 aaKnown RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 EPHX4Q8IUS5 362 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 TEX19Q8NA77 164 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SPPL2AQ8TCT8 520 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 BRIX1Q8TDN6 353 aaKnown RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 METTL21AQ8WXB1 218 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 HOXB13Q92826 284 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 KAT2AQ92830 837 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 DGAT2Q96PD7 388 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC29A1Q99808 456 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 LHPPQ9H008 270 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 GABARAPL1Q9H0R8 117 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SERHL2Q9H4I8 314 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 RUBCNLQ9H714 662 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 REEP1Q9H902 201 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 CXorf21Q9HAI6 301 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SMPD3Q9NY59 655 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 MAT2BQ9NZL9 334 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SEC14L3Q9UDX4 400 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 A8MUA0 341 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 SYT5O00445 386 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 SOCS2O14508 198 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 MAN1A2O60476 641 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 IFNW1P05000 195 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 CYC1P08574 325 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 RHCEP18577 417 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 AQP1P29972 269 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 KCNJ5P48544 419 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 RPS6KA3P51812 740 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 RPS26P62854 115 aaKnown RBP15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 ZNHIT3Q15649 155 aaPredicted RBP15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 IGFBP7Q16270 282 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 ARHGAP11BQ3KRB8 267 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 QSOX2Q6ZRP7 698 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 C16orf62Q7Z3J2 963 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 VTCN1Q7Z7D3 282 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 CYP4Z1Q86W10 505 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 GALNT12Q8IXK2 581 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 VWA5B2Q8N398 1253 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 CHDHQ8NE62 594 aaPredicted RBP15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 OR7G1Q8NGA0 311 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 FAM110BQ8TC76 370 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 RAB8BQ92930 207 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 MAGED4Q96JG8 741 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 ZNF354BQ96LW1 612 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 PINK1Q9BXM7 581 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 ALOXE3Q9BYJ1 711 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 MTHFD2LQ9H903 347 aaPredicted RBP15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 IFT52Q9Y366 437 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 ORC6Q9Y5N6 252 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 AP4B1Q9Y6B7 739 aa15.19■□□□□ 0.02
PDLIM1-201ENST00000329399 MAGEA13PA6NCF6 341 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 SERPINA7P05543 415 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 DCTP40126 519 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 CASRP41180 1078 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 RAD23AP54725 363 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 CASP9P55211 416 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 VLDLRP98155 873 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 MGAT2Q10469 447 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 LTB4RQ15722 352 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 MAPK11Q15759 364 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 NRF1Q16656 503 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 ZSWIM7Q19AV6 140 aa15.18■□□□□ 0.02
PDLIM1-201ENST00000329399 PRR30Q53SZ7 412 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms