RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 SLC38A3Q99624 504 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 SLC17A9Q9BYT1 436 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 CPEB1Q9BZB8 566 aaKnown RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 OR8D2Q9GZM6 311 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 RBFOX1Q9NWB1 397 aaKnown RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 TXNL4BQ9NX01 149 aaKnown RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 UPK1AO00322 258 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 MT-ND4P03905 459 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 IL32P24001 234 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 ITGB8P26012 769 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 UGT2B10P36537 528 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 WNT4P56705 351 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 RBBP4Q09028 425 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 PIP5KL1Q5T9C9 394 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 HAGHLQ6PII5 290 aaPredicted RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 FAM83HQ6ZRV2 1179 aaPredicted RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 VN1R2Q8NFZ6 395 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 OR52E4Q8NGH9 312 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 CCDC115Q96NT0 180 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 THAP7Q9BT49 309 aaPredicted RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 MED20Q9H944 212 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 WDR87Q6ZQQ6 2873 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 H0Y8X5 98 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 POLR1CO15160 346 aaPredicted RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 GRK5P34947 590 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 ERVK-25P63136 954 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 CRYZQ08257 329 aaKnown RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 VEZF1Q14119 521 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 PODNL1Q6PEZ8 512 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 L3MBTL4Q8NA19 623 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 SAMD8Q96LT4 415 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 CD180Q99467 661 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 ZNF471Q9BX82 626 aaPredicted RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 METTL17Q9H7H0 456 aaPredicted RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 TAS2R10Q9NYW0 307 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 COPZ2Q9P299 210 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 ZNF879B4DU55 563 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 DISC1C4P0D8 188 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 SDC3O75056 442 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 GNRH1P01148 92 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 PEPDP12955 493 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 PCMT1P22061 227 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 PCGF2P35227 344 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 CEBPGP53567 150 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 PRMT2P55345 433 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 TAS2R38P59533 333 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 CHRNEQ04844 493 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 RAB12Q6IQ22 244 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 KANSL1Q7Z3B3 1105 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 TMPRSS9Q7Z410 1059 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 OTUB2Q96DC9 234 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 NXPE2Q96DL1 559 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 INSM2Q96T92 566 aaPredicted RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 TSNAXQ99598 290 aaKnown RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 IL23AQ9NPF7 189 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 KLK4Q9Y5K2 254 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 TRPM6Q9BX84 2022 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 SLC25A12O75746 678 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 OSMP13725 252 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 MAOBP27338 520 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 P2RY2P41231 377 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 EXOSC7Q15024 291 aaKnown RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 CLPPQ16740 277 aaPredicted RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 GFOD2Q3B7J2 385 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 SLC36A4Q6YBV0 504 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 CPOQ8IVL8 374 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 OR4K14Q8NGD5 310 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 OR52E1Q8NGJ3 308 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 NTNG1Q9Y2I2 539 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 OR14I1A6ND48 311 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 RNASET2O00584 256 aaKnown RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 PAHP00439 452 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 SYPP08247 313 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 MMP12P39900 470 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 GZMKP49863 264 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 ZCCHC12Q6PEW1 402 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 USP53Q70EK8 1073 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 DPPA4Q7L190 304 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 BTBD1Q9H0C5 482 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 CYP8B1Q9UNU6 501 aa14.34□□□□□ -0.11
VARS2-201ENST00000321897 MRPS33Q9Y291 106 aaKnown RBP14.34□□□□□ -0.11
VARS2-201ENST00000321897 RAD1O60671 282 aa14.33□□□□□ -0.11
VARS2-201ENST00000321897 HOXC8P31273 242 aa14.33□□□□□ -0.11
VARS2-201ENST00000321897 KIAA1024LP59773 190 aa14.33□□□□□ -0.11
VARS2-201ENST00000321897 EPYCQ99645 322 aa14.33□□□□□ -0.11
VARS2-201ENST00000321897 DHRS9Q9BPW9 319 aa14.33□□□□□ -0.11
VARS2-201ENST00000321897 MBNL1Q9NR56 388 aaKnown RBP14.33□□□□□ -0.11
VARS2-201ENST00000321897 LTBP1Q14766 1721 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 DSCR3O14972 297 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 RP2O75695 350 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 SLC22A5O76082 557 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 FURINP09958 794 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 TRAM2Q15035 370 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 ITPRIPL2Q3MIP1 535 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 SAXO2Q658L1 398 aa14.33□□□□□ -0.12
VARS2-201ENST00000321897 ZNF782Q6ZMW2 699 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms