RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ARHGAP9Q9BRR9 750 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 FBXO34Q9NWN3 711 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 EXOSC1Q9Y3B2 195 aaKnown RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 LRRC72A6NJI9 287 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 SYT5O00445 386 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 IDH3BO43837 385 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 POLR2CP19387 275 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 GCGRP47871 477 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 RGS1Q08116 209 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 GLYR1Q49A26 553 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF425Q6IV72 752 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 MFSD12Q6NUT3 480 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 PLBD1Q6P4A8 553 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ASPGQ86U10 573 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 PEX5LQ8IYB4 626 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 CLDN22Q8N7P3 220 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 OR1E3Q8WZA6 343 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 HERVK_113Q902F9 699 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 TEX12Q9BXU0 123 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 CALML5Q9NZT1 146 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF443Q9Y2A4 671 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 CCDC182A6NF36 153 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 SURF4O15260 269 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ERVK-21P61565 698 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 TBRG1Q3YBR2 411 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 KLHL12Q53G59 568 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 FCRLBQ6BAA4 426 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 GLCCI1Q86VQ1 547 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 PRRG3Q9BZD7 231 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 HINT3Q9NQE9 182 aaKnown RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 P2RX6O15547 441 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 CCDC85BQ15834 202 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 FBXO42Q6P3S6 717 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF836Q6ZNA1 936 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 QSOX2Q6ZRP7 698 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF614Q8N883 585 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 OR4K14Q8NGD5 310 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 RFKQ969G6 155 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 WDFY2Q96P53 400 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 OR2M4Q96R27 311 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 TTYH2Q9BSA4 534 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ENKD1Q9H0I2 346 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 TMEM168Q9H0V1 697 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ISG20L2Q9H9L3 353 aaKnown RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ATP13A2Q9NQ11 1180 aa16.25■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF624Q9P2J8 865 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-201ENST00000320755 KDM4EB2RXH2 506 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 HYAL3O43820 417 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 CTSVO60911 334 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 RASGRP1O95267 797 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 SLC35G6P0C7Q6 338 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 GABRA5P31644 462 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 ADPRHP54922 357 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 RUNX2Q13950 521 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 P2RY14Q15391 338 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 MAPK14Q16539 360 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 PGGHGQ32M88 737 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 FIGNL1Q6PIW4 674 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 XKRXQ6PP77 449 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 NEIL3Q8TAT5 605 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 SETD6Q8TBK2 473 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 PHOSPHO2Q8TCD6 241 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 SMAP2Q8WU79 429 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 NUFIP1Q9UHK0 495 aaKnown RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 DOCK8Q8NF50 2099 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 LOC105369274A0A096LPK9 316 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 LOC102723532A0A0G2JNH3 316 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 SHISA3A0PJX4 238 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 STK25O00506 426 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 PVRP15151 417 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 C6orf183Q5T699 404 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 AADACL4Q5VUY2 407 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 CNIH2Q6PI25 160 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 PRSS41Q7RTY9 318 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 OR4N4Q8N0Y3 316 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 C10orf90Q96M02 699 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 MYADMQ96S97 322 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 SLC22A4Q9H015 551 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 TRIM45Q9H8W5 580 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 MTHFD2LQ9H903 347 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-201ENST00000320755 IL20Q9NYY1 176 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 TNFRSF10DQ9UBN6 386 aa16.24■□□□□ 0.19
COL9A1-201ENST00000320755 DUXAA6NLW8 204 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 POLR1CO15160 346 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-201ENST00000320755 HRO43593 1189 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 PRKAR1BP31321 381 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 RPS7P62081 194 aaKnown RBP16.23■□□□□ 0.19
COL9A1-201ENST00000320755 IL18Q14116 193 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 ITPRIPL2Q3MIP1 535 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 ZFP69Q49AA0 526 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 PRRT3Q5FWE3 981 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF620Q6ZNG0 422 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 PAQR7Q86WK9 346 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 SIRT6Q8N6T7 355 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 OR2T33Q8NG76 320 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 PFN4Q8NHR9 129 aa16.23■□□□□ 0.19
COL9A1-201ENST00000320755 PEX12O00623 359 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms