RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 CCM2LQ9NUG4 571 aaPredicted RBP14.06□□□□□ -0.16
FOXR1-201ENST00000317011 MED11Q9P086 117 aa14.06□□□□□ -0.16
FOXR1-201ENST00000317011 PTGDR2Q9Y5Y4 395 aa14.06□□□□□ -0.16
FOXR1-201ENST00000317011 RGS14O43566 566 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 TNFRSF21O75509 655 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 CRCPO75575 148 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 NKX2-2O95096 273 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 IGKV1D-16P01601 117 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 PRPS2P11908 318 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 GABRA3P34903 492 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 SUCLG1P53597 346 aaKnown RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 PRR5P85299 388 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 GANABQ14697 944 aaKnown RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 ZNF385BQ569K4 471 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 KANK2Q63ZY3 851 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 OR4K17Q8NGC6 315 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 STARD4Q96DR4 205 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 CCT7Q99832 543 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 RBM24Q9BX46 236 aaKnown RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 REEP4Q9H6H4 257 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 ACSS1Q9NUB1 689 aaPredicted RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 DDX18Q9NVP1 670 aaKnown RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 PPP4R1LQ9P1A2 415 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 MRTO4Q9UKD2 239 aaKnown RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 RPH3AQ9Y2J0 694 aaPredicted RBP14.05□□□□□ -0.16
FOXR1-201ENST00000317011 TMED5Q9Y3A6 229 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 ZNF337Q9Y3M9 751 aa14.05□□□□□ -0.16
FOXR1-201ENST00000317011 GXYLT2A0PJZ3 443 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 LSM1O15116 133 aaKnown RBP14.04□□□□□ -0.16
FOXR1-201ENST00000317011 SERPINE1P05121 402 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 NGFRP08138 427 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 SDC1P18827 310 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 PSMD4P55036 377 aaKnown RBP14.04□□□□□ -0.16
FOXR1-201ENST00000317011 C17orf67Q0P5P2 114 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 SH2D4BQ5SQS7 431 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 MARCH3Q86UD3 253 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 MED12LQ86YW9 2145 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 OR6Y1Q8NGX8 325 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 CDC26Q8NHZ8 85 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 C1GALT1C1Q96EU7 318 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 DKKL1Q9UK85 242 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 VPS13CQ709C8 3753 aa14.04□□□□□ -0.16
FOXR1-201ENST00000317011 MAP1AP78559 2803 aaPredicted RBP14.04□□□□□ -0.16
FOXR1-201ENST00000317011 PCNX3Q9H6A9 2034 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 HRNRQ86YZ3 2850 aaPredicted RBP14.03□□□□□ -0.16
FOXR1-201ENST00000317011 A0A1W2PNV4 684 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 EEF1E1-BLOC1S5C9J1V9 151 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 ALG1L2C9J202 215 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 MSTNO14793 375 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 EEF1E1O43324 174 aaKnown RBP14.03□□□□□ -0.16
FOXR1-201ENST00000317011 SCO2O43819 266 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 NPHS1O60500 1241 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 UTS2O95399 124 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 CGAP01215 116 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 LINC00032P0C843 101 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 HK1P19367 917 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 KIR2DL2P43627 348 aaPredicted RBP14.03□□□□□ -0.16
FOXR1-201ENST00000317011 MLC1Q15049 377 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 GUSBP1Q15486 140 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 ZNHIT3Q15649 155 aaPredicted RBP14.03□□□□□ -0.16
FOXR1-201ENST00000317011 ZCCHC12Q6PEW1 402 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 CAMKMTQ7Z624 323 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 GFM2Q969S9 779 aaKnown RBP14.03□□□□□ -0.16
FOXR1-201ENST00000317011 CIDECQ96AQ7 238 aaPredicted RBP14.03□□□□□ -0.16
FOXR1-201ENST00000317011 MTERF3Q96E29 417 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 PTGES2Q9H7Z7 377 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 C3orf14Q9HBI5 128 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 BAIAP2L1Q9UHR4 511 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 EDARQ9UNE0 448 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 TRAF6Q9Y4K3 522 aa14.03□□□□□ -0.16
FOXR1-201ENST00000317011 OR2M5A3KFT3 312 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 H0YC42 278 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 PDPK1O15530 556 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 LYPLA1O75608 230 aaPredicted RBP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 ANGPTL1O95841 491 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 HRGP04196 525 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 CHRNGP07510 517 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 BCKDHAP12694 445 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 TBXA2RP21731 343 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 LCN1P31025 176 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 MANFP55145 182 aaKnown RBP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 TPD52P55327 224 aaPredicted RBP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 EEFSECP57772 596 aaKnown RBP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 GRAMD1BQ3KR37 738 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 ARL13AQ5H913 290 aaPredicted RBP14.02□□□□□ -0.17
FOXR1-201ENST00000317011 OR2A2Q6IF42 318 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 ANKRD26P1Q6NSI1 321 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 LUZP2Q86TE4 346 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 TGIF2LYQ8IUE0 185 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 GRAMD2AQ8IUY3 354 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 GCNT2Q8N0V5 402 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 METTL25Q8N6Q8 603 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 CDRT4Q8N9R6 151 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 NUP43Q8NFH3 380 aa14.02□□□□□ -0.17
FOXR1-201ENST00000317011 OR4C3Q8NH37 302 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms