RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 OSTF1Q92882 214 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 ART5Q96L15 291 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 GHITMQ9H3K2 345 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
SKA3-202ENST00000314759 NUDT15Q9NV35 164 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 SLC23A2Q9UGH3 650 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 ADAM29Q9UKF5 820 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 GPR34Q9UPC5 381 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 KIAA1549LQ6ZVL6 1849 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 MYO10Q9HD67 2058 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 HEATR5BQ9P2D3 2071 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 FAM183AA6NL82 134 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 MAN2B1O00754 1011 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 RNF13O43567 381 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 ERAL1O75616 437 aaKnown RBP12.57□□□□□ -0.4
SKA3-202ENST00000314759 MTNR1BP49286 362 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 DUSP2Q05923 314 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 FAM46CQ5VWP2 391 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 SMARCD3Q6STE5 483 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
SKA3-202ENST00000314759 CEP76Q8TAP6 659 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 PIGXQ8TBF5 258 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 RFT1Q96AA3 541 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 BBS4Q96RK4 519 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 TNFRSF10DQ9UBN6 386 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 LOC105369274A0A096LPK9 316 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 A0A1W2PPV9 198 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 J3QRE1 110 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 RGS9O75916 674 aaPredicted RBP12.56□□□□□ -0.4
SKA3-202ENST00000314759 STATHP02808 62 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 INHAP05111 366 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 C6P13671 934 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 DRD2P14416 443 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 GALP22466 123 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 SSR2P43308 183 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 EPHA5P54756 1037 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 ST3GAL3Q11203 375 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 GALEQ14376 348 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 PGGHGQ32M88 737 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 HBMQ6B0K9 141 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 LRRC28Q86X40 367 aaPredicted RBP12.56□□□□□ -0.4
SKA3-202ENST00000314759 CPOQ8IVL8 374 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 CCDC116Q8IYX3 515 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 OR4N4Q8N0Y3 316 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 OR51G2Q8NGK0 314 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 TIMP4Q99727 224 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 ARHGDIGQ99819 225 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 MENTQ9BUN1 341 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 SLC38A1Q9H2H9 487 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
SKA3-202ENST00000314759 ENAMQ9NRM1 1142 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 WNT6Q9Y6F9 365 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 A0A1W2PS29 197 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 ATP6V1G2-DDX39BF2Z307 99 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 PGRMC2O15173 223 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 EEF1E1O43324 174 aaKnown RBP12.56□□□□□ -0.4
SKA3-202ENST00000314759 THY1P04216 161 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 FPR3P25089 353 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 THBS2P35442 1172 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 DBPQ10586 325 aaPredicted RBP12.56□□□□□ -0.4
SKA3-202ENST00000314759 GNA13Q14344 377 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 TEAD2Q15562 447 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 NRMQ8IXM6 262 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 GPR135Q8IZ08 494 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 FCRL4Q96PJ5 515 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 RBP7Q96R05 134 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 OSGEPL1Q9H4B0 414 aa12.56□□□□□ -0.4
SKA3-202ENST00000314759 RANBP3Q9H6Z4 567 aaPredicted RBP12.56□□□□□ -0.4
SKA3-202ENST00000314759 SYT5O00445 386 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 AHCYP23526 432 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 STOMP27105 288 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 SHC1P29353 583 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 NTSP30990 170 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TALDO1P37837 337 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 STAT5AP42229 794 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 RFX3P48380 749 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 RNF144AP50876 292 aaPredicted RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 ZNF81P51508 661 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 GRK1Q15835 563 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TMEM44Q2T9K0 475 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 FAM27D1Q5T7N8 215 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ZNF697Q5TEC3 545 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 KRT74Q7RTS7 529 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 OAFQ86UD1 273 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 BEST4Q8NFU0 473 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 OR5K2Q8NHB8 316 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ZFPM2Q8WW38 1151 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 CNRIP1Q96F85 164 aaPredicted RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 SCMH1Q96GD3 660 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ABHD1Q96SE0 405 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 MACROD1Q9BQ69 325 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 KLHL31Q9H511 634 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.55□□□□□ -0.4
SKA3-202ENST00000314759 TM7SF3Q9NS93 570 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 MARK1Q9P0L2 795 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 RWDD3Q9Y3V2 267 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 HCFC2Q9Y5Z7 792 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms