RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ACTRT3Q9BYD9 372 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 PIGUQ9H490 435 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 C15orf38-AP3S2A0A0A6YYH1 394 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 WIPF3A6NGB9 483 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 CAPN14A8MX76 684 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 NR5A2O00482 541 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 ZIC3O60481 467 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 SNX4O95219 450 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 ANGPTL1O95841 491 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 VIMP08670 466 aaKnown RBP10.95□□□□□ -0.66
SCFD1-201ENST00000311943 PLAURQ03405 335 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 GPR68Q15743 365 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 MAPK11Q15759 364 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 MAPK14Q16539 360 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 SAXO2Q658L1 398 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 SEM1Q6ZVN7 128 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 ACAD11Q709F0 780 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 MSRB3Q8IXL7 192 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 MIER2Q8N344 545 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 ADAMTS15Q8TE58 950 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 SSC4DQ8WTU2 575 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 XAGE5Q8WWM1 108 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 TMCO6Q96DC7 493 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 CCDC115Q96NT0 180 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 RSPO3Q9BXY4 272 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-201ENST00000311943 SLC25A37Q9NYZ2 338 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 FAM215AQ9Y5M1 114 aa10.95□□□□□ -0.66
SCFD1-201ENST00000311943 CSMD2Q7Z408 3487 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SLITRK5O94991 958 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 KCNH1O95259 989 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 BMP7P18075 431 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 IL11P20809 199 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 GRNP28799 593 aaKnown RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 POU6F2P78424 691 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SRYQ05066 204 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 TOMM34Q15785 309 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SYPL1Q16563 259 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 AGKQ53H12 422 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SLC30A6Q6NXT4 461 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ARHGAP11AQ6P4F7 1023 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 Q6ZPB1 254 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 PLCZ1Q86YW0 608 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 CCDC71Q8IV32 467 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF614Q8N883 585 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ANKFN1Q8N957 763 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 OR2M3Q8NG83 312 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 NEIL3Q8TAT5 605 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 GTF2H4Q92759 462 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SLC35G5Q96KT7 338 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SECISBP2Q96T21 854 aaKnown RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SDF2Q99470 211 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 TIMP4Q99727 224 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 IKZF5Q9H5V7 419 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 RUBCNLQ9H714 662 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 NEUROD4Q9HD90 331 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ACAD8Q9UKU7 415 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 FAF1Q9UNN5 650 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 VDAC3Q9Y277 283 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 CELSR2Q9HCU4 2923 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 HMGN4O00479 90 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 CDK2AP1O14519 115 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ADAM11O75078 769 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 TOXO94900 526 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ETFAP13804 333 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 MDH1P40925 334 aaKnown RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 PRIM2P49643 509 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 AGFG1P52594 562 aaKnown RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 CLNS1AP54105 237 aaKnown RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 CRYZQ08257 329 aaKnown RBP10.94□□□□□ -0.66
SCFD1-201ENST00000311943 C6orf10Q5SRN2 563 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 RETREG3Q86VR2 466 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 OR56A1Q8NGH5 318 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 BTBD2Q9BX70 525 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 UGT2B28Q9BY64 529 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ACBD3Q9H3P7 528 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF385DQ9H6B1 395 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 ZIM2Q9NZV7 527 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 PPP4R1LQ9P1A2 415 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 PCDHGB4Q9UN71 923 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 MEMO1Q9Y316 297 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 PCDHB14Q9Y5E9 798 aa10.94□□□□□ -0.66
SCFD1-201ENST00000311943 SPTBN1Q01082 2364 aaKnown RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 DOPEY1Q5JWR5 2465 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 C19orf84I3L1E1 186 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 RFXANKO14593 260 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 TNFRSF21O75509 655 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 HPNP05981 417 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 HOXB9P17482 250 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 UQCRC2P22695 453 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 CHI3L1P36222 383 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 ADH7P40394 386 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 CLDN15P56746 228 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 B3GALT5-AS1P59052 145 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 EFR3AQ14156 821 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 GSTA3Q16772 222 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 HSP90B2PQ58FF3 399 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 RPS26P11Q5JNZ5 115 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-201ENST00000311943 RPTNQ6XPR3 784 aa10.93□□□□□ -0.66
SCFD1-201ENST00000311943 DND1Q8IYX4 353 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms