RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 A0A0G2JMP0 313 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 A0A0X1KG70 313 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 UNCXA6NJT0 531 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 GABRPO00591 440 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ABLIM3O94929 683 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 CTSAP10619 480 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 CHRNB1P11230 501 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 IRS1P35568 1242 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 TRIM23P36406 574 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 XCR1P46094 333 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 PUM1Q14671 1186 aaKnown RBP eCLIP12.49□□□□□ -0.418e-6■□□□□ 8.1
CASC4-201ENST00000299957 LIN54Q6MZP7 749 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 CCDC28AQ8IWP9 274 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 CHCHD4Q8N4Q1 142 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 OR4M2Q8NGB6 313 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 OPALINQ96PE5 141 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 PRDM9Q9NQV7 894 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 QPCTLQ9NXS2 382 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ZNF639Q9UID6 485 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 CACNA1EQ15878 2313 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ANKRD34BA5PLL1 514 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 UNC119BA6NIH7 251 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 L7N2F9 121 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 DSCR3O14972 297 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 SCO1O75880 301 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 SCG5P05408 212 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 SYPP08247 313 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ZNF24P17028 368 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ENPP2Q13822 863 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 GJD3Q8N144 294 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 JAGN1Q8N5M9 183 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 LSM14AQ8ND56 463 aaKnown RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 OR52E1Q8NGJ3 308 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 APH1BQ8WW43 257 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 OR52D1Q9H346 318 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 MKKSQ9NPJ1 570 aaPredicted RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 PHF11Q9UIL8 331 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 KLK4Q9Y5K2 254 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 SPTA1P02549 2419 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 A0A087WUU8 490 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 OR2W5A6NFC9 320 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 TVP23AA6NH52 213 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 DBIP07108 87 aaKnown RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 F8A1P23610 371 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 CCR6P51684 374 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 FAM71E1Q6IPT2 247 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 CASTOR1Q8WTX7 329 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 OR7D2Q96RA2 312 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 CPEB1Q9BZB8 566 aaKnown RBP12.49□□□□□ -0.41
CASC4-201ENST00000299957 NOX1Q9Y5S8 564 aa12.49□□□□□ -0.41
CASC4-201ENST00000299957 ASXL3Q9C0F0 2248 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 ACOD1A6NK06 481 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 PRRT4C9JH25 899 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 EIF3FO00303 357 aaPredicted RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 AIFM1O95831 613 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 HRGP04196 525 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 PROS1P07225 676 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 CTSLP07711 333 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 VAMP1P23763 118 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 SLC1A3P43003 542 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 TAF13Q15543 124 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 ABI3BPQ7Z7G0 1075 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 LRRC25Q8N386 305 aaPredicted RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 GDPD1Q8N9F7 314 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 OR13C5Q8NGS8 318 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 OR56A3Q8NH54 315 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 RPLP0P6Q8NHW5 317 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 IL21Q9HBE4 155 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 POT1Q9NUX5 634 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 CNOT2Q9NZN8 540 aaKnown RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 TMEM221A6NGB7 291 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 M0R233 179 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 FABP7O15540 132 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 HOXB2P14652 356 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 HIST1H1TP22492 207 aaPredicted RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 MAOBP27338 520 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 ERP29P30040 261 aaKnown RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 EVI2BP34910 448 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 CDK3Q00526 305 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 ALG10BQ5I7T1 473 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 CDKL4Q5MAI5 379 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 SLC39A5Q6ZMH5 540 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 TTLL10Q6ZVT0 673 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 NRROSQ86YC3 692 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 TTLQ8NG68 377 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 LMF1Q96S06 567 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 PLA2G12AQ9BZM1 189 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 MRPS33Q9Y291 106 aaKnown RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 DOCK1Q14185 1865 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 C1orf226A1L170 272 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 WISP3O95389 354 aaPredicted RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 ANXA3P12429 323 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 PCSK2P16519 638 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms