RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SLC6A8P48029 635 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 KCNJ5P48544 419 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 PTH2RP49190 550 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 PNLIPRP2P54317 469 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 NR1H2P55055 460 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 DSCR4P56555 118 aaPredicted RBP8.34□□□□□ -1.07
CNOT9-202ENST00000295701 TRA2BP62995 288 aaKnown RBP8.34□□□□□ -1.07
CNOT9-202ENST00000295701 EEF1A1P68104 462 aaKnown RBP8.34□□□□□ -1.07
CNOT9-202ENST00000295701 PSG6Q00889 435 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 CLCQ05315 142 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 PON3Q15166 354 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 EXOC3L2Q2M3D2 409 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 TEX35Q5T0J7 233 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 EEF1A1P5Q5VTE0 462 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 RAET1LQ5VY80 246 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 OR2A2Q6IF42 318 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 MARCH3Q86UD3 253 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 LRRN4CLQ8ND94 238 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 MAPK1IP1LQ8NDC0 245 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 DUSP19Q8WTR2 217 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 IGFBPL1Q8WX77 278 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 NPAS1Q99742 590 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 ACPTQ9BZG2 426 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 RAB17Q9H0T7 212 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 ACSS3Q9H6R3 686 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 RNF122Q9H9V4 155 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 ZNF226Q9NYT6 803 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 PPP4R1LQ9P1A2 415 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 MCM8Q9UJA3 840 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 SNX6Q9UNH7 406 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 COL6A5A8TX70 2615 aa8.34□□□□□ -1.07
CNOT9-202ENST00000295701 FBN3Q75N90 2809 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.33□□□□□ -1.08
CNOT9-202ENST00000295701 TRIM49D1C9J1S8 452 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 POC1B-GALNT4F8VUJ3 575 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 EMC8O43402 210 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 PLOD3O60568 738 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 BCAS2O75934 225 aaPredicted RBP8.33□□□□□ -1.08
CNOT9-202ENST00000295701 OTCP00480 354 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 OPN1LWP04000 364 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 FPR1P21462 350 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 TBXA2RP21731 343 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF155Q12901 538 aaPredicted RBP8.33□□□□□ -1.08
CNOT9-202ENST00000295701 CAPRIN1Q14444 709 aaKnown RBP8.33□□□□□ -1.08
CNOT9-202ENST00000295701 GUSBP1Q15486 140 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 ERCC6LQ2NKX8 1250 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 LGSNQ5TDP6 509 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 APOOLQ6UXV4 268 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 DCAKDQ8WVC6 231 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 MTBPQ96DY7 904 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 KLHDC3Q9BQ90 382 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 MRPL57Q9BQC6 102 aaKnown RBP8.33□□□□□ -1.08
CNOT9-202ENST00000295701 SLC35C2Q9NQQ7 365 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 ELOVL5Q9NYP7 299 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 TMCO1Q9UM00 188 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 OR10H1Q9Y4A9 318 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 TIMM22Q9Y584 194 aa8.33□□□□□ -1.08
CNOT9-202ENST00000295701 YLPM1P49750 1951 aaKnown RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 GNG14A0A1W2PPG7 69 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 F8W735 103 aaPredicted RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 DLX3O60479 287 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 TNFRSF21O75509 655 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 SUPT7LO94864 414 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 ALX3O95076 343 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 NTN1O95631 604 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 IGKV1D-16P01601 117 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 JUNP05412 331 aaKnown RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 INHBAP08476 426 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 CD8BP10966 210 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 CASQ1P31415 396 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 RFX3P48380 749 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 PCYT1AP49585 367 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 KRTAP1-1Q07627 177 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 C2orf80Q0P641 193 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 TNK1Q13470 666 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 TSNAXIP1Q2TAA8 658 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF678Q5SXM1 525 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 PPP4R4Q6NUP7 873 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 TMEM107Q6UX40 140 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 SYT10Q6XYQ8 523 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 STAC2Q6ZMT1 411 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 PLEKHM3Q6ZWE6 761 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 CXXC5Q7LFL8 322 aaKnown RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 FAM9CQ8IZT9 166 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 CDC26Q8NHZ8 85 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 METTL6Q8TCB7 284 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 TMEM237Q96Q45 408 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 BBS4Q96RK4 519 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 KCNA7Q96RP8 456 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 PAFAH2Q99487 392 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 SLC39A3Q9BRY0 314 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 C1QTNF3Q9BXJ4 246 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 MRPL46Q9H2W6 279 aaKnown RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 CDC42EP4Q9H3Q1 356 aaKnown RBP8.32□□□□□ -1.08
CNOT9-202ENST00000295701 NMRK1Q9NWW6 199 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 TMEM216Q9P0N5 145 aa8.32□□□□□ -1.08
CNOT9-202ENST00000295701 PROCRQ9UNN8 238 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms