RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RORCP51449 518 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 NKX2-5P52952 324 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 VSX2P58304 361 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 KIAA1024LP59773 190 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 MLLT11Q13015 90 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 LINC00471Q8N535 108 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 CELF2-AS1Q8N7Q2 184 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 FLVCR1-AS1Q8TAF5 88 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 DPH1Q9BZG8 443 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 MED20Q9H944 212 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 TBC1D17Q9HA65 648 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 TESQ9UGI8 421 aaKnown RBP14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 PHF11Q9UIL8 331 aa14.74□□□□□ -0.05
NCKIPSD-201ENST00000294129 SYT5O00445 386 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 HCRTR1O43613 425 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 HYAL3O43820 417 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SNX4O95219 450 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SDC2P34741 201 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 RCVRNP35243 200 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 TSFMP43897 325 aaKnown RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 WNT4P56705 351 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ILF3Q12906 894 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■■■■□ 22.8
NCKIPSD-201ENST00000294129 INSL4Q14641 139 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 LARS2Q15031 903 aaKnown RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 TUBA3EQ6PEY2 450 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 CCBE1Q6UXH8 406 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 CD300LDQ6UXZ3 194 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 COX18Q8N8Q8 333 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ACOT11Q8WXI4 607 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SERINC2Q96SA4 455 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 TMED9Q9BVK6 235 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 TRIM45Q9H8W5 580 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 CRNNQ9UBG3 495 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 A3GALT2U3KPV4 340 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 HYKKA2RU49 373 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SGK494L7N484 410 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 CDC123O75794 336 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SLC16A1P53985 500 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 KIR2DS3Q14952 304 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 KLHL22Q53GT1 634 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 FCRLBQ6BAA4 426 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SDF2Q99470 211 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ATP13A2Q9NQ11 1180 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ZNF670-ZNF695F2Z2N8 137 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SOCS6O14544 535 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ASNA1O43681 348 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 PRKAR1BP31321 381 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SSTR4P31391 388 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 GCGRP47871 477 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 TMPRSS11AQ6ZMR5 421 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 CCDC190Q86UF4 302 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 PFN4Q8NHR9 129 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 GRHL3Q8TE85 626 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SDHCQ99643 169 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ZFYVE21Q9BQ24 234 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 CCDC3Q9BQI4 270 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 LMAN2LQ9H0V9 348 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 MTHFD2LQ9H903 347 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 SIAEQ9HAT2 523 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 MUTYHQ9UIF7 546 aa14.73□□□□□ -0.05
NCKIPSD-201ENST00000294129 ISPDA4D126 451 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 LALBAP00709 142 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 MRPL2Q5T653 305 aaKnown RBP14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 RASSF6Q6ZTQ3 369 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 ABHD13Q7L211 337 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 GDPD3Q7L5L3 318 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 UBE2J2Q8N2K1 259 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 CAMKVQ8NCB2 501 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 SMAD5Q99717 465 aaKnown RBP14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 HDHD5Q9BXW7 423 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 CPNE7Q9UBL6 633 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 OR2W5A6NFC9 320 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 CEBPEQ15744 281 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 CPOQ8IVL8 374 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 ASB15Q8WXK1 588 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 ABCB9Q9NP78 766 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 ITGB1BP2Q9UKP3 347 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 SLC22A7Q9Y694 548 aa14.72□□□□□ -0.05
NCKIPSD-201ENST00000294129 GXYLT2A0PJZ3 443 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 SLC35F4A4IF30 521 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 URADA6NGE7 173 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 CT62P0C5K7 136 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 GABRA3P34903 492 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 DCST2Q5T1A1 773 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 TAF8Q7Z7C8 310 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 OR2L13Q8N349 312 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 OR51G2Q8NGK0 314 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 NT5CQ8TCD5 201 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 MCOLN1Q9GZU1 580 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 ENKD1Q9H0I2 346 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 C20orf141Q9NUB4 165 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 MAT2BQ9NZL9 334 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 MALT1Q9UDY8 824 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 SNTNA6NMZ2 147 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 GNB5O14775 395 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 LIMS3P0CW19 117 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 LIMS4P0CW20 117 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 CELP19835 753 aa14.71□□□□□ -0.05
NCKIPSD-201ENST00000294129 GAS1P54826 345 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms