RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 BCORP1Q8N888 145 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 MKKSQ9NPJ1 570 aaPredicted RBP11.21□□□□□ -0.61
SDE2-201ENST00000272091 ZNF226Q9NYT6 803 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 IGLV3-12A0A075B6K2 115 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 M0R129 80 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 CNOT3O75175 753 aaKnown RBP11.21□□□□□ -0.61
SDE2-201ENST00000272091 CHMP24386 653 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 NR1H2P55055 460 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 TPD52P55327 224 aaPredicted RBP11.21□□□□□ -0.61
SDE2-201ENST00000272091 RGS8P57771 180 aaPredicted RBP11.21□□□□□ -0.61
SDE2-201ENST00000272091 BIKQ13323 160 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 FLYWCH1Q4VC44 716 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 TMEM236Q5W0B7 351 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 SHISA6Q6ZSJ9 500 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 GDF7Q7Z4P5 450 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 NKAIN4Q8IVV8 208 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 BMPERQ8N8U9 685 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 OR4K5Q8NGD3 323 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 SLC2A12Q8TD20 617 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 MCHR1Q99705 422 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 FLRT3Q9NZU0 649 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 TMCC3Q9ULS5 477 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 SRPK3Q9UPE1 567 aa11.21□□□□□ -0.61
SDE2-201ENST00000272091 LNP1A1A4G5 178 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 XPNPEP2O43895 674 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 OR10H3O60404 316 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 CYP7B1O75881 506 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 TAS2R41P59536 307 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 ZFP36L1Q07352 338 aaKnown RBP11.21□□□□□ -0.62
SDE2-201ENST00000272091 CCDC103Q8IW40 242 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 OR7G1Q8NGA0 311 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 GFM1Q96RP9 751 aaKnown RBP11.21□□□□□ -0.62
SDE2-201ENST00000272091 NUDT9Q9BW91 350 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 ADNPQ9H2P0 1102 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 R4GN57 208 aa11.21□□□□□ -0.62
SDE2-201ENST00000272091 A0A087WXM4 84 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 SCRG1O75711 98 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 TNNI3P19429 210 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 RFX3P48380 749 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 SMIM11AP58511 58 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PTGES3Q15185 160 aaKnown RBP11.2□□□□□ -0.62
SDE2-201ENST00000272091 WDR88Q6ZMY6 472 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 SETD9Q8NE22 299 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 ADIPOR1Q96A54 375 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PRSS27Q9BQR3 290 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 CBLCQ9ULV8 474 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 DRD5P21918 477 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 ZNHIT3Q15649 155 aaPredicted RBP11.2□□□□□ -0.62
SDE2-201ENST00000272091 PHF19Q5T6S3 580 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PRICKLE2Q7Z3G6 844 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 APLFQ8IW19 511 aaPredicted RBP11.2□□□□□ -0.62
SDE2-201ENST00000272091 CNOT9Q92600 299 aaKnown RBP11.2□□□□□ -0.62
SDE2-201ENST00000272091 PMM1Q92871 262 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PMEPA1Q969W9 287 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 UCK2Q9BZX2 261 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 FAM192AQ9GZU8 254 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 RASSF1Q9NS23 344 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 MKL2Q9ULH7 1088 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 ZNF232Q9UNY5 417 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 CCNYL3P0C7X3 344 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 KRT20P35900 424 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 CRISP1P54107 249 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 NUP107P57740 925 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 ELAVL1Q15717 326 aaKnown RBP11.2□□□□□ -0.62
SDE2-201ENST00000272091 ZNF141Q15928 474 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 EIPR1Q53HC9 387 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 C1orf94Q6P1W5 598 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 ZNF773Q6PK81 442 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 C9orf40Q8IXQ3 194 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 STT3BQ8TCJ2 826 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 RARRES3Q9UL19 164 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
SDE2-201ENST00000272091 PIP5K1CO60331 668 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 SOX14O95416 240 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ONECUT2O95948 504 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ZNF883P0CG24 379 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 GABARAPL2P60520 117 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 TARDBPQ13148 414 aaKnown RBP eCLIP11.19□□□□□ -0.62
SDE2-201ENST00000272091 XAF1Q6GPH4 301 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 KIF18BQ86Y91 864 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 SLC41A3Q96GZ6 507 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 CTRCQ99895 268 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 APOL4Q9BPW4 351 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 OR8D2Q9GZM6 311 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 AKIRIN1Q9H9L7 192 aaPredicted RBP11.19□□□□□ -0.62
SDE2-201ENST00000272091 ZNF556Q9HAH1 456 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 KLHL28Q9NXS3 571 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 DNAJB12Q9NXW2 375 aaKnown RBP11.19□□□□□ -0.62
SDE2-201ENST00000272091 SLC13A4Q9UKG4 626 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 ANGPTL1O95841 491 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 OSMP13725 252 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 NSDHLQ15738 373 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 CD300LDQ6UXZ3 194 aa11.19□□□□□ -0.62
SDE2-201ENST00000272091 PLEKHM3Q6ZWE6 761 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms