RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SLC25A35Q3KQZ1 300 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 AMIGO1Q86WK6 493 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 HOMEZQ8IX15 550 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 GRHL3Q8TE85 626 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 SETD7Q8WTS6 366 aaKnown RBP15.7■□□□□ 0.1
SQLE-201ENST00000265896 AP3S1Q92572 193 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 DNAJA3Q96EY1 480 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 ABCG5Q9H222 651 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 DPEP2Q9H4A9 486 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 CERS4Q9HA82 394 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 ACOXLQ9NUZ1 547 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 USP36Q9P275 1121 aaKnown RBP15.7■□□□□ 0.1
SQLE-201ENST00000265896 ENTPD4Q9Y227 616 aa15.7■□□□□ 0.1
SQLE-201ENST00000265896 A0A1W2PRG6 482 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 ALX3O95076 343 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 KHKP50053 298 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 PRSS45Q7RTY3 260 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 C17orf47Q8NEP4 570 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 OR4E2Q8NGC2 313 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 OR2A1Q8NGT9 310 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 POF1BQ8WVV4 589 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 VPS13AQ96RL7 3174 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 TRAV27A0A087WT01 109 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 ZSCAN5BA6NJL1 495 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 J3QLW9 94 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 MID1O15344 667 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 ZNF19P17023 458 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 DRD5P21918 477 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 OMPP47874 163 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 CCR6P51684 374 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 MINDY4Q4G0A6 757 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 LAMTOR1Q6IAA8 161 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 GPR135Q8IZ08 494 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
SQLE-201ENST00000265896 FGF11Q92914 225 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 MENTQ9BUN1 341 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 ADAP2Q9NPF8 381 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 CA5BQ9Y2D0 317 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 AP1M2Q9Y6Q5 423 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 A0A0A6YYD5 115 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 ACADMP11310 421 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 RPS5P46782 204 aaKnown RBP15.69■□□□□ 0.1
SQLE-201ENST00000265896 GNG2P59768 71 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 EFNB1P98172 346 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 GPR176Q14439 515 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 GXYLT1Q4G148 440 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 FIGNL1Q6PIW4 674 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 ERN2Q76MJ5 926 aaKnown RBP15.69■□□□□ 0.1
SQLE-201ENST00000265896 GDF7Q7Z4P5 450 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 OR4D9Q8NGE8 314 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 PIGXQ8TBF5 258 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 SLC35A4Q96G79 324 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 TMEM43Q9BTV4 400 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 DKK3Q9UBP4 350 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 LIPT1Q9Y234 373 aa15.69■□□□□ 0.1
SQLE-201ENST00000265896 COL4A3Q01955 1670 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 MDC1Q14676 2089 aaKnown RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 A0A0A6YYJ9 748 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 A0A1W2PQ72 361 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 SURF4O15260 269 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 PRKNO60260 465 aaPredicted RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 HIST1H1TP22492 207 aaPredicted RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 GZMKP49863 264 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 COX10Q12887 443 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 MRPL28Q13084 256 aaKnown RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 HNRNPA1L2Q32P51 320 aaKnown RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 EOGTQ5NDL2 527 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 WDR88Q6ZMY6 472 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 KLHL36Q8N4N3 616 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 FBXO15Q8NCQ5 510 aaPredicted RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 FAM83CQ9BQN1 747 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 ZNF559Q9BR84 538 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 SLC28A3Q9HAS3 691 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 MRPS30Q9NP92 439 aaKnown RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 ENAMQ9NRM1 1142 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 DEC1Q9P2X7 70 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 CBLCQ9ULV8 474 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 PLXNA2O75051 1894 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 TSPAN11A1L157 253 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 PEX12O00623 359 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 CXCL3P19876 107 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 PAICSP22234 425 aaKnown RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 CTNNB1P35222 781 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 PPP3R1P63098 170 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 REEP5Q00765 189 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 FZD5Q13467 585 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 MAPK14Q16539 360 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 NRSN1Q8IZ57 195 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 ELMOD2Q8IZ81 293 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 SLAIN1Q8ND83 568 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 ADAMTS15Q8TE58 950 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 RASSF5Q8WWW0 418 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 MS4A6EQ96DS6 147 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 CLIP3Q96DZ5 547 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 SLC41A3Q96GZ6 507 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 ABHD1Q96SE0 405 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 SLC6A20Q9NP91 592 aa15.68■□□□□ 0.1
SQLE-201ENST00000265896 APOBEC3BQ9UH17 382 aaKnown RBP15.68■□□□□ 0.1
SQLE-201ENST00000265896 A0A1W2PP55 124 aa15.67■□□□□ 0.1
SQLE-201ENST00000265896 TMEM129A0AVI4 362 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms