RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NSDHLQ15738 373 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 WDR53Q7Z5U6 358 aaPredicted RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 GOLM1Q8NBJ4 401 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 RABL2AQ9UBK7 228 aaPredicted RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 RABL2BQ9UNT1 228 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 RHBDD3Q9Y3P4 386 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF840PA6NDX5 716 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 CD70P32970 193 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 PTGER1P34995 402 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 SPINT3P49223 89 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 PIP5KL1Q5T9C9 394 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 B3GNT7Q8NFL0 401 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 SMIM3Q9BZL3 60 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 APMAPQ9HDC9 416 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 CD300AQ9UGN4 299 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 MYADML2A6NDP7 307 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 MAGEA6P43360 314 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 MGAT3Q09327 533 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 SYT3Q9BQG1 590 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 TUBG2Q9NRH3 451 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 RFPL3O75679 317 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 CRYZL1O95825 349 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 MAOAP21397 527 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 COQ5Q5HYK3 327 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 FIGLAQ6QHK4 219 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 TMEM185AQ8NFB2 350 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 CHFRQ96EP1 664 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 FANCGO15287 622 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 SDC3O75056 442 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 RAB3DO95716 219 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 MC3RP41968 323 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 METTL11BQ5VVY1 283 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 TMEM151BQ8IW70 566 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 OR6C2Q9NZP2 312 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 LILRB5O75023 590 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 DCTP40126 519 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 SELENOWP63302 87 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 THAP7Q9BT49 309 aaPredicted RBP17■□□□□ 0.31
COL5A3-201ENST00000264828 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF888P0CJ79 500 aaPredicted RBP17■□□□□ 0.31
COL5A3-201ENST00000264828 CD68P34810 354 aaPredicted RBP17■□□□□ 0.31
COL5A3-201ENST00000264828 MANEALQ5VSG8 457 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 DPY19L2P1Q6NXN4 242 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 CRTC1Q6UUV9 634 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 PAQR8Q8TEZ7 354 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 TCTEX1D2Q8WW35 142 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF681Q96N22 645 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 CPNE5Q9HCH3 593 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 MDFIC2A0A1B0GVS7 189 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 A6NCN8 305 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 ENDOUP21128 410 aaKnown RBP17■□□□□ 0.31
COL5A3-201ENST00000264828 OTX2P32243 289 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 SFTPDP35247 375 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 CCDC71LQ8N9Z2 235 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 OR1S1Q8NH92 325 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 OR14A2Q96R54 314 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 RBM24Q9BX46 236 aaKnown RBP17■□□□□ 0.31
COL5A3-201ENST00000264828 OR51B6Q9H340 312 aa17■□□□□ 0.31
COL5A3-201ENST00000264828 H3BML4 177 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 PRKACAP17612 351 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 SSTR2P30874 369 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 PROX2Q3B8N5 592 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 NXF5Q9H1B4 397 aaKnown RBP16.99■□□□□ 0.31
COL5A3-201ENST00000264828 FAM86C1Q9NVL1 165 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 LOC102723532A0A0G2JNH3 316 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 A0A1B0GVG6 124 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 WDPCPO95876 746 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 SERPINA5P05154 406 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 GSTM4Q03013 218 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 RAB41Q5JT25 222 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 NT5C3BQ969T7 300 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 GIMAP5Q96F15 307 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 LOC105369274A0A096LPK9 316 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 HEPACAM2A8MVW5 462 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 LIX1LQ8IVB5 337 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 OR4N4Q8N0Y3 316 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 CHST14Q8NCH0 376 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 OR5AR1Q8NGP9 310 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 OR14L1PQ8NHC6 308 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 BADQ92934 168 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 PELOQ9BRX2 385 aaKnown RBP16.99■□□□□ 0.31
COL5A3-201ENST00000264828 IER3IP1Q9Y5U9 82 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 SLAMF9Q96A28 289 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 FOXN4Q96NZ1 517 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 UNKLQ9H9P5 680 aaKnown RBP16.99■□□□□ 0.31
COL5A3-201ENST00000264828 STARD5Q9NSY2 213 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 RIMS3Q9UJD0 308 aa16.99■□□□□ 0.31
COL5A3-201ENST00000264828 ANKRD28O15084 1053 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 GPR37L1O60883 481 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 GABRR1P24046 479 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 C1orf220Q5T0J3 134 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 IL22RA1Q8N6P7 574 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 F5H5K5 113 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF43P17038 809 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 RAB28P51157 221 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 UBE2NP61088 152 aaKnown RBP16.98■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF252P-AS1Q0IIN9 211 aa16.98■□□□□ 0.31
COL5A3-201ENST00000264828 KEAP1Q14145 624 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms