RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ZNF45Q02386 682 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 C6orf132Q5T0Z8 1188 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 SLX4IPQ5VYV7 408 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 RBM18Q96H35 190 aaKnown RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 CPNE5Q9HCH3 593 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 MTRF1O75570 445 aaKnown RBP15.27■□□□□ 0.04
CTCF-201ENST00000264010 SEMA4FO95754 770 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 CH25HO95992 272 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 ERGP11308 486 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 BMP4P12644 408 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 CDH11P55287 796 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 HSF2Q03933 536 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 CHRNEQ04844 493 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 SLC16A12Q6ZSM3 486 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 FBXL6Q8N531 539 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 SLC30A2Q9BRI3 323 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 TMEM168Q9H0V1 697 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 SLC6A20Q9NP91 592 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 SOHLH2Q9NX45 425 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 LINC01565O15544 149 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 FRS3O43559 492 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 ORC5O43913 435 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 SLC19A1P41440 591 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 GAB4Q2WGN9 574 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 NOXA1Q86UR1 476 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 HCN2Q9UL51 889 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 ENTPD2Q9Y5L3 495 aa15.27■□□□□ 0.04
CTCF-201ENST00000264010 A0A1W2PPV9 198 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 GCM2O75603 506 aaPredicted RBP15.27■□□□□ 0.03
CTCF-201ENST00000264010 EGFP01133 1207 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 GIPRP48546 466 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 GALEQ14376 348 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 CRTC2Q53ET0 693 aaPredicted RBP15.27■□□□□ 0.03
CTCF-201ENST00000264010 OLIG3Q7RTU3 272 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 AMER3Q8N944 861 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.03
CTCF-201ENST00000264010 OR6T1Q8NGN1 323 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 SLC7A13Q8TCU3 470 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 FBLIM1Q8WUP2 373 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 ELP4Q96EB1 424 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 ZNF764Q96H86 408 aaPredicted RBP15.27■□□□□ 0.03
CTCF-201ENST00000264010 BCL2L10Q9HD36 194 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 PLXNA4Q9HCM2 1894 aa15.27■□□□□ 0.03
CTCF-201ENST00000264010 UGT2B10P36537 528 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 LIM2P55344 173 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 LCN1P1Q5VSP4 162 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 AGAP6Q5VW22 663 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 Q6ZSR6 202 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 CREB3L4Q8TEY5 395 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 AGAP4Q96P64 663 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 PDCD10Q9BUL8 212 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 PTGFRNQ9P2B2 879 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 EXOSC1Q9Y3B2 195 aaKnown RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 A0A1W2PRQ8 180 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 SYT5O00445 386 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 CLDN4O14493 209 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 CDRT1O95170 752 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 ARFIP1P53367 373 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 VSX2P58304 361 aaPredicted RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 ZNF91Q05481 1191 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 EEF1A2Q05639 463 aaKnown RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 AGAP7PQ5VUJ5 663 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 PRAMEF8Q5VWM4 474 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 PRAMEF7Q5VXH5 474 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 ZNF793Q6ZN11 406 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 STX12Q86Y82 276 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 C10orf53Q8N6V4 93 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 CSNK1A1LQ8N752 337 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 RPLP0P6Q8NHW5 317 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 FYTTD1Q96QD9 318 aaKnown RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 RPP25Q9BUL9 199 aaKnown RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 MROQ9BYG7 248 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 WASHC1A8K0Z3 465 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 ALX3O95076 343 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 IFNA7P01567 189 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 TYRP1P17643 537 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 RABIFP47224 123 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 SNRPGP62308 76 aaKnown RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 PPP2CBP62714 309 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 PPP2CAP67775 309 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 PAMR1Q6UXH9 720 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 WASH2PQ6VEQ5 465 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 COMMD7Q86VX2 200 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 VRK2Q86Y07 508 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 FKBP10Q96AY3 582 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 ZC3H10Q96K80 434 aaKnown RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 SIRT3Q9NTG7 399 aaPredicted RBP15.26■□□□□ 0.03
CTCF-201ENST00000264010 KLK4Q9Y5K2 254 aa15.26■□□□□ 0.03
CTCF-201ENST00000264010 TRIM64BA6NI03 449 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 SMLR1H3BR10 107 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 FCARP24071 287 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 SSTR4P31391 388 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 YPEL5P62699 121 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 TNFRSF17Q02223 184 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 FGL2Q14314 439 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 AGERQ15109 404 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 LAIR2Q6ISS4 152 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 NRARPQ7Z6K4 114 aa15.25■□□□□ 0.03
CTCF-201ENST00000264010 ASCC3Q8N3C0 2202 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms