RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CD53P19397 219 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 TBXA2RP21731 343 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 GCAP28676 217 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 GAS1P54826 345 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 KRTAP21-3Q3LHN1 58 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 GLYR1Q49A26 553 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-202ENST00000262396 ANKRD34AQ69YU3 496 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 ANKRD26P1Q6NSI1 321 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 FRMD7Q6ZUT3 714 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 ZNF551Q7Z340 670 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-202ENST00000262396 ZNF550Q7Z398 422 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 DDIASQ8IXT1 998 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 OR2L13Q8N349 312 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 CDRT4Q8N9R6 151 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 GATSQ8NAP1 163 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 NUP43Q8NFH3 380 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 FBXO30Q8TB52 745 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 PIK3R3Q92569 461 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 G6PC3Q9BUM1 346 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 PAQR5Q9NXK6 330 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-202ENST00000262396 FLRT3Q9NZU0 649 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 A0A087WZY1 265 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 GXYLT2A0PJZ3 443 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 H0YC42 278 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 UBFD1O14562 309 aaKnown RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 AZIN1O14977 448 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 NUDT14O95848 222 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 ALOX5P09917 674 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 UGT2B10P36537 528 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 HPCAL1P37235 193 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 PRIM2P49643 509 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 SUCLG1P53597 346 aaKnown RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 TPD52P55327 224 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 CLDN20P56880 219 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 B3GALT5-AS1P59052 145 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 RPL38P63173 70 aaKnown RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 PRR5P85299 388 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 LTBQ06643 244 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 ACKR1Q16570 336 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 GRAMD1BQ3KR37 738 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 SPDYE7PQ495Y7 208 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 GALNTL6Q49A17 601 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 Q5PR19 223 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 CLEC6AQ6EIG7 209 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 GTF2IRD2BQ6EKJ0 949 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 FIGNL1Q6PIW4 674 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 FAM214BQ7L5A3 538 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 TRIM46Q7Z4K8 759 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 GALNT10Q86SR1 603 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 GTF2IRD2Q86UP8 949 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 HOMEZQ8IX15 550 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 COX18Q8N8Q8 333 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 ZNF610Q8N9Z0 462 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 TRIM44Q96DX7 344 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 PERPQ96FX8 193 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 SH3YL1Q96HL8 342 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 METTL2AQ96IZ6 378 aaKnown RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 TSSK3Q96PN8 268 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 LMF2Q9BU23 707 aaKnown RBP11.03□□□□□ -0.64
TRAF4-202ENST00000262396 REEP4Q9H6H4 257 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 TAS2R7Q9NYW3 318 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 CLEC4AQ9UMR7 237 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 ZFHX3Q15911 3703 aa11.03□□□□□ -0.64
TRAF4-202ENST00000262396 MPDZO75970 2070 aa11.02□□□□□ -0.64
TRAF4-202ENST00000262396 TLDC2A0PJX2 215 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 TMEM114B3SHH9 223 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 SHISA8B8ZZ34 492 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 G3V2L1 256 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 H3BNH8 94 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 SMAD7O15105 426 aaKnown RBP11.02□□□□□ -0.65
TRAF4-202ENST00000262396 PLIN3O60664 434 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 OPN1LWP04000 364 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 PROCP04070 461 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 FAM153BP0C7A2 387 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 CD8BP10966 210 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 CRYGSP22914 178 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 MAPK1P28482 360 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 KIR2DL2P43627 348 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-202ENST00000262396 ASMTP46597 345 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 SERPINB4P48594 390 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 DNAJB13P59910 316 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 FAM153CQ494X1 144 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-202ENST00000262396 C20orf204Q6ZNR8 217 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 R3HCC1LQ7Z5L2 792 aaKnown RBP11.02□□□□□ -0.65
TRAF4-202ENST00000262396 EXOC3L1Q86VI1 746 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 MISPQ8IVT2 679 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 GSPT2Q8IYD1 628 aaKnown RBP11.02□□□□□ -0.65
TRAF4-202ENST00000262396 OR6Y1Q8NGX8 325 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 CLHC1Q8NHS4 586 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 CIDECQ96AQ7 238 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-202ENST00000262396 MS4A4EQ96PG1 132 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 BDH2Q9BUT1 245 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 RNF122Q9H9V4 155 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 PPCSQ9HAB8 311 aa11.02□□□□□ -0.65
TRAF4-202ENST00000262396 EML4Q9HC35 981 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms