RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MENTQ9BUN1 341 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 PLA2G2FQ9BZM2 168 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 OR51J1Q9H342 316 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 DPAGT1Q9H3H5 408 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 RERGLQ9H628 205 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 IGFLR1Q9H665 355 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 CERS4Q9HA82 394 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 CYSLTR2Q9NS75 346 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 COPZ2Q9P299 210 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 KIF25Q9UIL4 384 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 SLC17A4Q9Y2C5 497 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 CACNG2Q9Y698 323 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 CIB4A0PJX0 185 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 SMIM30A4D0T7 59 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 C5orf58C9J3I9 102 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 PLRG1O43660 514 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 IFNA16P05015 189 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 CHRM5P08912 532 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 LAMP2P13473 410 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 AHCYP23526 432 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 GBX2P52951 348 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 EPHA4P54764 986 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 MEF2AQ02078 507 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 MADCAM1Q13477 382 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 SHHQ15465 462 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 LGALSLQ3ZCW2 172 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 BCL2L15Q5TBC7 163 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 RTL4Q6ZR62 310 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 MRGPREQ86SM8 312 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 ASPGQ86U10 573 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 MARCH9Q86YJ5 346 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 OR11H4Q8NGC9 324 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 OR5M3Q8NGP4 307 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 OR2L8Q8NGY9 312 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 NEIL3Q8TAT5 605 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 ZNF354BQ96LW1 612 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 C12orf66Q96MD2 445 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 FERD3LQ96RJ6 166 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 MYADMQ96S97 322 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 KXD1Q9BQD3 176 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 DPCDQ9BVM2 203 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 LGR4Q9BXB1 951 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 GSX2Q9BZM3 304 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 RNF32Q9H0A6 362 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 ERVMER34-1Q9H9K5 563 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 ZNF275Q9NSD4 429 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 EXTL2Q9UBQ6 330 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 GLS2Q9UI32 602 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 ACSL6Q9UKU0 697 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 PLAGL1Q9UM63 463 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 PRKAB1Q9Y478 270 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 MAB21L2Q9Y586 359 aa10.12□□□□□ -0.79
CHRNA1-201ENST00000261007 TRPM6Q9BX84 2022 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 MEIKINA0A087WXM9 373 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 A0A1W2PRQ8 180 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 SAP18O00422 153 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 GABRPO00591 440 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 PLPP1O14494 284 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 KHNYNO15037 678 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 HOXC4P09017 264 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 LIMS3P0CW19 117 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 LIMS4P0CW20 117 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ELK1P19419 428 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 C4BPBP20851 252 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 GSTM3P21266 225 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ZP3P21754 424 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 RBMS1P29558 406 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 NTSR1P30989 418 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 KIR2DL1P43626 348 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 KCNJ5P48544 419 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 CSTF1Q05048 431 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 PRDX1Q06830 199 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 CAMK2DQ13557 499 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 FGFBP1Q14512 234 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 MLC1Q15049 377 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 MPEG1Q2M385 716 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 TMEM44Q2T9K0 475 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ENTPD8Q5MY95 495 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ZNF740Q8NDX6 193 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 GPR32P1Q8NGA4 272 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 GANCQ8TET4 914 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 GABRG3Q99928 467 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 FAIM2Q9BWQ8 316 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ABCG5Q9H222 651 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 NKX2-4Q9H2Z4 354 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 MBNL1Q9NR56 388 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ACSS1Q9NUB1 689 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 MED9Q9NWA0 146 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 EMC3Q9P0I2 261 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 SCP2D1Q9UJQ7 156 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 RABL2BQ9UNT1 228 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 ZFR2Q9UPR6 939 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 CLCA2Q9UQC9 943 aa10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 PCYT1BQ9Y5K3 369 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-201ENST00000261007 A0A1W2PPV9 198 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms