RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 KCNAB2Q13303 367 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 METTL6Q8TCB7 284 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CNOT9Q92600 299 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 NACC2Q96BF6 587 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ANKRD60Q9BZ19 345 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 RIBC2Q9H4K1 309 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 H2AFY2Q9P0M6 372 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 DOCK11Q5JSL3 2073 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 MS4A18H0YCH9 400 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SNRPB2P08579 225 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 FAM58BPP0C7Q3 252 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ELAVL4P26378 380 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 C21orf33P30042 268 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SUCLG1P53597 346 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 PIN1Q13526 163 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 MS4A18Q3C1V0 323 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ARSKQ6UWY0 536 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 TMEM107Q6UX40 140 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 C11orf74Q86VG3 221 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 C19orf47Q8N9M1 422 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 NAXEQ8NCW5 288 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ZFP28Q8NHY6 868 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 TMEM255BQ8WV15 326 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ARL5BQ96KC2 179 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC29A3Q9BZD2 475 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 C3orf14Q9HBI5 128 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 KLHL28Q9NXS3 571 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 MYRFQ9Y2G1 1151 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SUPT3HB4E1H0 165 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ANGPT2O15123 496 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SSX4O60224 188 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 BRINP1O60477 761 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 PCNAP12004 261 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 AHRP35869 848 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 HNF4AP41235 474 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 GSSP48637 474 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 UBXN2BQ14CS0 331 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 AADACL4Q5VUY2 407 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 BHLHB9Q6PI77 547 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF675Q8TD23 568 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 RPL3LQ92901 407 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 SPATA5L1Q9BVQ7 753 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CCDC90BQ9GZT6 254 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 A4GALTQ9NPC4 353 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 NDUFA13Q9P0J0 144 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CEPT1Q9Y6K0 416 aa5.12□□□□□ -1.59
TOPBP1-201ENST00000260810 CDC14CA4D256 554 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 KLHL33A6NCF5 533 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 M0QX08 132 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 AIM2O14862 343 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC22A2O15244 555 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ATE1O95260 518 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 KDELR2P33947 212 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TNFRSF17Q02223 184 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 PWP1Q13610 501 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 RHBDD2Q6NTF9 364 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 PGBD2Q6P3X8 592 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 NCCRP1Q6ZVX7 275 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 KRT78Q8N1N4 520 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TCAIMQ8N3R3 496 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 OR8J3Q8NGG0 315 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC41A3Q96GZ6 507 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 MUS81Q96NY9 551 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 SOSTQ9BQB4 213 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CCDC3Q9BQI4 270 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 GABARAPL3Q9BY60 117 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ADNPQ9H2P0 1102 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TPT1P8Q9HAU6 139 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 BCL2L10Q9HD36 194 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ANKMY1Q9P2S6 941 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 RPS6KB2Q9UBS0 482 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 KLHL3Q9UH77 587 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CDC14AQ9UNH5 594 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TNPO3Q9Y5L0 923 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 LIPGQ9Y5X9 500 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 BCAT2O15382 392 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 PIN1P1O15428 100 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CREG1O75629 220 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ANXA6P08133 673 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ENO3P13929 434 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ACTR1BP42025 376 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CLNS1AP54105 237 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ACTR1AP61163 376 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ETFDHQ16134 617 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 VMACQ2NL98 169 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 FBXO43Q4G163 708 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 FIGLAQ6QHK4 219 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF836Q6ZNA1 936 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 IGFBPL1Q8WX77 278 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CDS1Q92903 461 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 PGLYRP3Q96LB9 341 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 IMP3Q9NV31 184 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 KCNG2Q9UJ96 466 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 ASAH2BP0C7U1 165 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CAPZA2P47755 286 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 RPL6Q02878 288 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 CD47Q08722 323 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 EPS8Q12929 822 aa5.11□□□□□ -1.59
TOPBP1-201ENST00000260810 TEAD4Q15561 434 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms