RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CTRB2Q6GPI1 263 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 PSRC1Q6PGN9 363 aaPredicted RBP17.71■□□□□ 0.43
SNX4-201ENST00000251775 DTX3Q8N9I9 347 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 PHOSPHO2Q8TCD6 241 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 PCNPQ8WW12 178 aaKnown RBP17.71■□□□□ 0.43
SNX4-201ENST00000251775 HERVK_113Q902F9 699 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 RFT1Q96AA3 541 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 RGMAQ96B86 450 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 AICDAQ9GZX7 198 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 SAP130Q9H0E3 1048 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 PCBD2Q9H0N5 130 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 NEUROD4Q9HD90 331 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 CHD9Q3L8U1 2897 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 KDM4EB2RXH2 506 aaPredicted RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 LATO43561 262 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 DHFRP00374 187 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 ANXA3P12429 323 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 ZNF267Q14586 743 aaPredicted RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 PDGFRLQ15198 375 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 MLF2Q15773 248 aaPredicted RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 EOGTQ5NDL2 527 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 TANGO2Q6ICL3 276 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 WASH2PQ6VEQ5 465 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 OR4F15Q8NGB8 312 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 FERD3LQ96RJ6 166 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 INSM2Q96T92 566 aaPredicted RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 FNDC11Q9BVV2 318 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 TEX101Q9BY14 249 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 XKR8Q9H6D3 395 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 IMP3Q9NV31 184 aaKnown RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 NUDT15Q9NV35 164 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 SERGEFQ9UGK8 458 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 ATG2BQ96BY7 2078 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 IGKV1-8A0A0C4DH67 115 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 PRAMEF27A3QJZ7 478 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 SNTNA6NMZ2 147 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 ACP5P13686 325 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 FCARP24071 287 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 AANATQ16613 207 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 FAM46CQ5VWP2 391 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 GET4Q7L5D6 327 aaPredicted RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 MRGPREQ86SM8 312 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 OR8D4Q8NGM9 314 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 HSD17B8Q92506 261 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 TREX2Q9BQ50 279 aaPredicted RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 ZNF649Q9BS31 505 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 CYSLTR2Q9NS75 346 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 PRKAG2Q9UGJ0 569 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 SNRNP200O75643 2136 aaKnown RBP17.7■□□□□ 0.42
SNX4-201ENST00000251775 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
SNX4-201ENST00000251775 STATHP02808 62 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 SERPIND1P05546 499 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 GJA4P35212 333 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 CCT3P49368 545 aaKnown RBP17.69■□□□□ 0.42
SNX4-201ENST00000251775 EXOSC2Q13868 293 aaKnown RBP17.69■□□□□ 0.42
SNX4-201ENST00000251775 FGFBP1Q14512 234 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 IDNKQ5T6J7 187 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 PRICKLE2Q7Z3G6 844 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 TBC1D19Q8N5T2 526 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 KLK6Q92876 244 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 C12orf66Q96MD2 445 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 ZNF607Q96SK3 696 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 DPCDQ9BVM2 203 aaPredicted RBP17.69■□□□□ 0.42
SNX4-201ENST00000251775 GRK1Q15835 563 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 SYPL1Q16563 259 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 ZNF791Q3KP31 576 aaPredicted RBP17.69■□□□□ 0.42
SNX4-201ENST00000251775 LGALSLQ3ZCW2 172 aaPredicted RBP17.69■□□□□ 0.42
SNX4-201ENST00000251775 CLLU1Q5K131 121 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 SLC27A4Q6P1M0 643 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 VITQ6UXI7 678 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 ADCK2Q7Z695 626 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 GPALPP1Q8IXQ4 340 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 ESX1Q8N693 406 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 POGLUT1Q8NBL1 392 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 OR6C4Q8NGE1 309 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 OR5M3Q8NGP4 307 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 ACOT12Q8WYK0 555 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 DDX31Q9H8H2 851 aaKnown RBP17.69■□□□□ 0.42
SNX4-201ENST00000251775 CTPS2Q9NRF8 586 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 ENAMQ9NRM1 1142 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 PTTG3PQ9NZH4 202 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 CACNG2Q9Y698 323 aa17.69■□□□□ 0.42
SNX4-201ENST00000251775 GRXCR1A8MXD5 290 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 SLC28A2O43868 658 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 KAT7O95251 611 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 MPC2O95563 127 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 RAB8AP61006 207 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 SNTA1Q13424 505 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 FGL2Q14314 439 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 IRF4Q15306 451 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 NTRK2Q16620 822 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 OR4C11Q6IEV9 310 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 KIAA1161Q6NSJ0 714 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
SNX4-201ENST00000251775 IL20RBQ6UXL0 311 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 GALNT11Q8NCW6 608 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 DPH7Q9BTV6 452 aa17.68■□□□□ 0.42
SNX4-201ENST00000251775 B3GNT4Q9C0J1 378 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms