RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RASGRP1O95267 797 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 OR12D1P0DN82 309 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 P2RX3P56373 397 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 PCBP4P57723 403 aaKnown RBP15.88■□□□□ 0.13
FOXA1-201ENST00000250448 IL18Q14116 193 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 BTBD16Q32M84 506 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 MINDY4Q4G0A6 757 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 ENTPD8Q5MY95 495 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 Q6ZSR6 202 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 SYT13Q7L8C5 426 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 SHFQ7M4L6 423 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 OR13H1Q8NG92 308 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 UPRTQ96BW1 309 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 EGLN3Q9H6Z9 239 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 TBC1D29Q9UFV1 150 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 SNTNA6NMZ2 147 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 TBX6O95947 436 aaPredicted RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 LIMS3P0CW19 117 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 LIMS4P0CW20 117 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 KELP23276 732 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SOX18P35713 384 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 NFATC4Q14934 902 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 KHDRBS2Q5VWX1 349 aaKnown RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 FAM129CQ86XR2 697 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SETD7Q8WTS6 366 aaKnown RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 DEDD2Q8WXF8 326 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SLC9A6Q92581 669 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SNAPC3Q92966 411 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SLC35G5Q96KT7 338 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 F2RL3Q96RI0 385 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 ATF6BQ99941 703 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 ARHGAP9Q9BRR9 750 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 TMEM43Q9BTV4 400 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 OR51I1Q9H343 314 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 TCEAL2Q9H3H9 227 aaPredicted RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 ING3Q9NXR8 418 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SLC9A8Q9Y2E8 581 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 GPR52Q9Y2T5 361 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 DNMT3AQ9Y6K1 912 aaPredicted RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 GSTM3P21266 225 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 BSGP35613 385 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 FRKP42685 505 aaPredicted RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 MTNR1AP48039 350 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 CCT3P49368 545 aaKnown RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 KRT33BQ14525 404 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 UAP1L1Q3KQV9 507 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 LCTLQ6UWM7 567 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SZRD1Q7Z422 152 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 SFTPA2Q8IWL1 248 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 LINC01555Q8NAE3 123 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 TEX47Q8TBZ9 253 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 OR2M4Q96R27 311 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 TIMM29Q9BSF4 260 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 TRIM45Q9H8W5 580 aaPredicted RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 CUEDC1Q9NWM3 386 aaPredicted RBP15.87■□□□□ 0.13
FOXA1-201ENST00000250448 ACSL5Q9ULC5 683 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 WDR87Q6ZQQ6 2873 aa15.87■□□□□ 0.13
FOXA1-201ENST00000250448 GPR89AB7ZAQ6 455 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 GPR89BP0CG08 455 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 NR2F1P10589 423 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 PTBP1P26599 531 aaKnown RBP eCLIP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 COL9A2Q14055 689 aaPredicted RBP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 OLIG3Q7RTU3 272 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 OR5D16Q8NGK9 328 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 MSANTD3Q96H12 275 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 PRRC1Q96M27 445 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 WDR92Q96MX6 357 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 MENTQ9BUN1 341 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 MS4A8Q9BY19 250 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 CTPS2Q9NRF8 586 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 NCR1O76036 304 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 UBXN7O94888 489 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 EVX1P49640 407 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 SF3A2Q15428 464 aaKnown RBP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 MEX3DQ86XN8 651 aaKnown RBP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 MARCH9Q86YJ5 346 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 SLC22A18ASQ8N1D0 253 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 OR6T1Q8NGN1 323 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 XAGE5Q8WWM1 108 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 DCLRE1CQ96SD1 692 aaKnown RBP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 TRAF4Q9BUZ4 470 aaPredicted RBP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 GTPBP2Q9BX10 602 aaKnown RBP15.86■□□□□ 0.13
FOXA1-201ENST00000250448 SAP130Q9H0E3 1048 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 MCUBQ9NWR8 336 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 TRPC4Q9UBN4 977 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 CLCA2Q9UQC9 943 aa15.86■□□□□ 0.13
FOXA1-201ENST00000250448 SLC43A1O75387 559 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 LALBAP00709 142 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 PPP2R1BP30154 601 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 AKT2P31751 481 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 ACTR1BP42025 376 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 ACTR1AP61163 376 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 RRAS2P62070 204 aaPredicted RBP15.85■□□□□ 0.13
FOXA1-201ENST00000250448 RIN1Q13671 783 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 WDR45BQ5MNZ6 344 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 SLC27A4Q6P1M0 643 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 HMGN2P46Q86SG4 172 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 ZNF485Q8NCK3 441 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 ANGPTL6Q8NI99 470 aa15.85■□□□□ 0.13
FOXA1-201ENST00000250448 MED30Q96HR3 178 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms