RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CITED4Q96RK1 184 aa11.8□□□□□ -0.52
RAB3IP-201ENST00000247833 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
RAB3IP-201ENST00000247833 ATP13A2Q9NQ11 1180 aa11.8□□□□□ -0.52
RAB3IP-201ENST00000247833 USP36Q9P275 1121 aaKnown RBP11.8□□□□□ -0.52
RAB3IP-201ENST00000247833 PCDHGB2Q9Y5G2 931 aa11.8□□□□□ -0.52
RAB3IP-201ENST00000247833 HELZP42694 1942 aaKnown RBP11.8□□□□□ -0.52
RAB3IP-201ENST00000247833 GABRPO00591 440 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 RFX2P48378 723 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 NNATQ16517 81 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 PUS10Q3MIT2 529 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ZNF658BQ4V348 819 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 PRRT3Q5FWE3 981 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 AGBL4Q5VU57 503 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 RANBP3LQ86VV4 465 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 GJD3Q8N144 294 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 VWA5B2Q8N398 1253 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 FANK1Q8TC84 345 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 CD180Q99467 661 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 C1QTNF7Q9BXJ2 289 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 RNF121Q9H920 327 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 POLR1CO15160 346 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 LIMS3P0CW19 117 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 LIMS4P0CW20 117 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 F3P13726 295 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 CPEP16870 476 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ETV6P41212 452 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ERVK-21P61565 698 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 FUT5Q11128 374 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 PGGHGQ32M88 737 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 TMEM201Q5SNT2 666 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ASPGQ86U10 573 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SAMD12Q8N8I0 201 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 MORN4Q8NDC4 146 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 OR7G2Q8NG99 324 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 OR6F1Q8NGZ6 308 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 CCL4L1Q8NHW4 92 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SETD6Q8TBK2 473 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SLC35B4Q969S0 331 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SLC35A4Q96G79 324 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 RIPOR3Q96MK2 946 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 HDAC8Q9BY41 377 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 OR2B2Q9GZK3 357 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 MIXL1Q9H2W2 232 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 HINT3Q9NQE9 182 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 PRDM7Q9NQW5 492 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 TAS2R7Q9NYW3 318 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 LIPT1Q9Y234 373 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ASB4Q9Y574 426 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 FAM86C2PA6NEL3 165 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 B3GALT2O43825 422 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 OR10H2O60403 315 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SDHBP21912 280 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 RPS21P63220 83 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 NDUFA5Q16718 116 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 ZNF542PQ5EBM4 170 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SNAP47Q5SQN1 464 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 GDF7Q7Z4P5 450 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 OR2L8Q8NGY9 312 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 OR4Q3Q8NH05 313 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 STARD5Q9NSY2 213 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 SPACA6W5XKT8 324 aa11.79□□□□□ -0.52
RAB3IP-201ENST00000247833 POM121BA6NF01 834 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 FAM47E-STBD1D6RA91 191 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 HMGN1P05114 100 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 MSL3P1P0C860 447 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 PKLRP30613 574 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 GABRA5P31644 462 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 PPP3R1P63098 170 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 HTRA4P83105 476 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 ZNF155Q12901 538 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 EXOSC7Q15024 291 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 TATDN3Q17R31 274 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 C7orf61Q8IZ16 206 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 ACBD7Q8N6N7 88 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 C10orf53Q8N6V4 93 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 RERGQ96A58 199 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 CLIP3Q96DZ5 547 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 AICDAQ9GZX7 198 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 MKRN2Q9H000 416 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 OR52D1Q9H346 318 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 THAP10Q9P2Z0 257 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 PLEKHB1Q9UF11 243 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 TRAV6A0A075B6T7 132 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 TRAV27A0A087WT01 109 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 IQCMA0A1B0GVH7 501 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 SMLR1H3BR10 107 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 CDC123O75794 336 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 EPPINO95925 133 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 TRA2BP62995 288 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 CDK5Q00535 292 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 FGL2Q14314 439 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 FAM27D1Q5T7N8 215 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 MTFR2Q6P444 385 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 DCLRE1CQ96SD1 692 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 APOOQ9BUR5 198 aa11.78□□□□□ -0.52
RAB3IP-201ENST00000247833 ISG20L2Q9H9L3 353 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms