RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TMEM64Q6YI46 380 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 GDPGP1Q6ZNW5 385 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 Q6ZPB1 254 aaPredicted RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 PLEKHG7Q6ZR37 379 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 HEATR4Q86WZ0 1026 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 ADGRF3Q8IZF5 1079 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 HORMAD2Q8N7B1 307 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 OR52J3Q8NH60 311 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 SLC38A5Q8WUX1 472 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 SUSD6Q92537 303 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 RPL3LQ92901 407 aaKnown RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 RSPRY1Q96DX4 576 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 TMEM19Q96HH6 336 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 ZNF354BQ96LW1 612 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 IL17FQ96PD4 163 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 NEURL2Q9BR09 285 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 SSBP3Q9BWW4 388 aaPredicted RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 UCK2Q9BZX2 261 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 SP140LQ9H930 580 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 NMNAT1Q9HAN9 279 aaPredicted RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 CPNE5Q9HCH3 593 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 SIRT3Q9NTG7 399 aaPredicted RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 SELENONQ9NZV5 590 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 THAP10Q9P2Z0 257 aaPredicted RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 P2RX2Q9UBL9 471 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 TAC3Q9UHF0 121 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 MKLN1Q9UL63 735 aa7.36□□□□□ -1.23
CXCR4-201ENST00000241393 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.36□□□□□ -1.23
CXCR4-201ENST00000241393 KRTAP23-1A1A580 65 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 AGAP5A6NIR3 686 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 HEPACAM2A8MVW5 462 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 J3KTA2 159 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 NDUFS4O43181 175 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SNX4O95219 450 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 H1F0P07305 194 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 STSP08842 583 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SLC35G4P0C7Q5 338 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 HOXA5P20719 270 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ETV6P41212 452 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 COX10Q12887 443 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 KRR1Q13601 381 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CAMK1Q14012 370 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 GNA13Q14344 377 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PUM1Q14671 1186 aaKnown RBP eCLIP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 DUSP7Q16829 419 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SYT16Q17RD7 645 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SPDYE7PQ495Y7 208 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ARMCX4Q5H9R4 360 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SLC25A30Q5SVS4 291 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 DCST1Q5T197 706 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PIP5KL1Q5T9C9 394 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PRAMEF8Q5VWM4 474 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PRAMEF7Q5VXH5 474 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TMEM236Q5W0B7 351 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 C12orf73Q69YU5 71 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PLAG1Q6DJT9 500 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 KIAA1161Q6NSJ0 714 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 BHLHB9Q6PI77 547 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PTCHD4Q6ZW05 846 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 C6orf120Q7Z4R8 191 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TRIM69Q86WT6 500 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 KRT73Q86Y46 540 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ZBTB8BQ8NAP8 495 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 B3GNT7Q8NFL0 401 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 GPR32P1Q8NGA4 272 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SFXN5Q8TD22 340 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SMG7Q92540 1137 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 NR4A3Q92570 626 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SMARCD2Q92925 531 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 MOAP1Q96BY2 351 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ADOQ96SZ5 270 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TIMM29Q9BSF4 260 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SPATA5L1Q9BVQ7 753 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 FAIM2Q9BWQ8 316 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TEX101Q9BY14 249 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 ALOXE3Q9BYJ1 711 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 RMI1Q9H9A7 625 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TRPV4Q9HBA0 871 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SLC25A19Q9HC21 320 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 BCL2L10Q9HD36 194 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 MS4A12Q9NXJ0 267 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 GPR83Q9NYM4 423 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CFL2Q9Y281 166 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 IFT52Q9Y366 437 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 SNX8Q9Y5X2 465 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PEX16Q9Y5Y5 336 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TCF20Q9UGU0 1960 aaKnown RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 MN1Q10571 1320 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 A0A0A6YYD5 115 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 PNMA8CA0A1B0GUJ8 204 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 A0A1W2PPV9 198 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 A0A1W2PRQ8 180 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 LINC01553A4QN01 128 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 MBD3L3A6NE82 208 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-201ENST00000241393 M0QYG6 137 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 TLR4O00206 839 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 CCRL2O00421 344 aa7.35□□□□□ -1.23
CXCR4-201ENST00000241393 HMGN4O00479 90 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms