RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RPS10-NUDT3A0A1W2PQS6 291 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 KPNA3O00505 521 aaPredicted RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 KLF4O43474 513 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 OR1F1O43749 312 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 LCMT2O60294 686 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 DRD2P14416 443 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 AHRP35869 848 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SHC2P98077 582 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 LHX8Q68G74 356 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 GPR139Q6DWJ6 353 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 OR4C11Q6IEV9 310 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 PYHIN1Q6K0P9 492 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 LUZP2Q86TE4 346 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 DCUN1D3Q8IWE4 304 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 PCNPQ8WW12 178 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 TFGQ92734 400 aaPredicted RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 HGDQ93099 445 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ZNF558Q96NG5 402 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 TBX5Q99593 518 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 C17orf62Q9BQA9 187 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ALG8Q9BVK2 526 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SLC13A4Q9UKG4 626 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ZC3H12DA2A288 527 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 MAN2B1O00754 1011 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 CDK2AP1O14519 115 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 PIP5K1CO60331 668 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ERAL1O75616 437 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 OR7A10O76100 309 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 LRG1P02750 347 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 THY1P04216 161 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ERGP11308 486 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 GIFP27352 417 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 DUSP2Q05923 314 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 CAMK2DQ13557 499 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 LY6G5CQ5SRR4 150 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 TMEM64Q6YI46 380 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ZNF793Q6ZN11 406 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 CXXC5Q7LFL8 322 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 DEFB128Q7Z7B8 93 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ADGRD2Q7Z7M1 963 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 GJD3Q8N144 294 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 OR2T33Q8NG76 320 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 NR4A3Q92570 626 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ZNF514Q96K75 400 aaPredicted RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 AICDAQ9GZX7 198 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ANKRD19PQ9H560 264 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 A0A0G2JK05 382 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 TGM5O43548 720 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 FZD7O75084 574 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 MPC2O95563 127 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SERPIND1P05546 499 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 CD3GP09693 182 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SSTR2P30874 369 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 NTSP30990 170 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 CCR2P41597 374 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SSR2P43308 183 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 ANXA11P50995 505 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 POU6F2P78424 691 aaPredicted RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 DBPQ10586 325 aaPredicted RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 RPA4Q13156 261 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SNTA1Q13424 505 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 EXOSC2Q13868 293 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 MFSD13AQ14CX5 517 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 DECR1Q16698 335 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 FAM46CQ5VWP2 391 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 TMEM99Q8N816 258 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 TRMT10AQ8TBZ6 339 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 AHCYL2Q96HN2 611 aaKnown RBP14.49□□□□□ -0.09
DDX55-201ENST00000238146 SAMD8Q96LT4 415 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SPHK2Q9NRA0 654 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 UCKL1Q9NWZ5 548 aa14.49□□□□□ -0.09
DDX55-201ENST00000238146 SLC9B1P1A6NJY1 282 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 CDC42EP2O14613 210 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 F8A1P23610 371 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 TRA2BP62995 288 aaKnown RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 SREBF2Q12772 1141 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 GRK1Q15835 563 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 HACD4Q5VWC8 232 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PLBD1Q6P4A8 553 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 ARL9Q6T311 187 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 SLC51BQ86UW2 128 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 COMMD7Q86VX2 200 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 CCDC116Q8IYX3 515 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 TMEM255BQ8WV15 326 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 YIPF5Q969M3 257 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 NACC2Q96BF6 587 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 NUS1Q96E22 293 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 LRIG1Q96JA1 1093 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 C1QTNF7Q9BXJ2 289 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 CACNG6Q9BXT2 260 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 COQ3Q9NZJ6 369 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 GPR34Q9UPC5 381 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 STON1Q9Y6Q2 735 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 RNF215Q9Y6U7 377 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 A0A1W2PS29 197 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 E9PI62 339 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 GPR171O14626 319 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PGRMC2O15173 223 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms