RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RAB28P51157 221 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 CAV3P56539 151 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 EIF4HQ15056 248 aaKnown RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 WDR45BQ5MNZ6 344 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 MAMDC2Q7Z304 686 aaPredicted RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 ZNF440Q8IYI8 595 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 SAP130Q9H0E3 1048 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 M0QZQ0 153 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 RFPL3O75679 317 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 DCNP07585 359 aaKnown RBP12.63□□□□□ -0.39
NEK4-201ENST00000233027 JMJD7P0C870 316 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 ACTBP60709 375 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 ACTG1P63261 375 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 FOXN4Q96NZ1 517 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 PHB2Q99623 299 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 GORASP2Q9H8Y8 452 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 OR6C2Q9NZP2 312 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 IL17CQ9P0M4 197 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 CRHBPP24387 322 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 SSTR2P30874 369 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 HHEXQ03014 270 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 ARHGAP12Q8IWW6 846 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 SULT4A1Q9BR01 284 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 ST6GALNAC5Q9BVH7 336 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 NELFAQ9H3P2 528 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 TAS2R8Q9NYW2 309 aa12.63□□□□□ -0.39
NEK4-201ENST00000233027 TRAV27A0A087WT01 109 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 LDB3O75112 727 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 CRTAPO75718 401 aaPredicted RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 DIRAS3O95661 229 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 NSDHLQ15738 373 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 ZNF767PQ75MW2 155 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 GGHQ92820 318 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 DDIT4LQ96D03 193 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 SHDQ96IW2 340 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 C4orf36Q96KX1 117 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 MEPEQ9NQ76 525 aaPredicted RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 EPHA1P21709 976 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 SRYQ05066 204 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 GLYATL2Q8WU03 294 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 A6NLC8 198 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 B8ZZF3 427 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 SGK494L7N484 410 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 AGPAT2O15120 278 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 YY2O15391 372 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 DUX1O43812 170 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 BRINP1O60477 761 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 HTR3BO95264 441 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 TMEM225BP0DP42 221 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 DLSTP36957 453 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 LMNTD1Q8N9Z9 388 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 SERINC2Q96SA4 455 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 SLC17A9Q9BYT1 436 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 C7orf72A4D263 438 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 ERVK-25P63136 954 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 LIPIQ6XZB0 460 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 TMEM239Q8WW34 195 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 FAM71F1Q96KD3 344 aaPredicted RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 CLMPQ9H6B4 373 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 ZNF701M0R085 212 aaPredicted RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 CNMDO75829 334 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 NDUFB2O95178 105 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 PRSS3P35030 304 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 LUMP51884 338 aaPredicted RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 MGAT3Q09327 533 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 VEZF1Q14119 521 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 MBTPS1Q14703 1052 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 BCL7AQ4VC05 210 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 VRK2Q86Y07 508 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 DIO2Q92813 273 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 METTL2AQ96IZ6 378 aaKnown RBP12.62□□□□□ -0.39
NEK4-201ENST00000233027 EGLN2Q96KS0 407 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
NEK4-201ENST00000233027 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 FAM183AA6NL82 134 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 CENPBD1B2RD01 187 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 PRICKLE3O43900 615 aaPredicted RBP12.61□□□□□ -0.39
NEK4-201ENST00000233027 PRAMEF2O60811 474 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 CRYZL1O95825 349 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 METTL11BQ5VVY1 283 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 KIAA1211LQ6NV74 962 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 NAA11Q9BSU3 229 aaPredicted RBP12.61□□□□□ -0.39
NEK4-201ENST00000233027 MROH6A6NGR9 719 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 UGDHO60701 494 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 INAVAQ3KP66 663 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 ACSM3Q53FZ2 586 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 PODNL1Q6PEZ8 512 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 BEST4Q8NFU0 473 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 ITPKCQ96DU7 683 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 CNTNAP3BQ96NU0 1288 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 FTSJ1Q9UET6 329 aa12.61□□□□□ -0.39
NEK4-201ENST00000233027 H3BML4 177 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms