RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 GPR137Q96N19 417 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 SPATA5L1Q9BVQ7 753 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX3-201ENST00000230085 OR51B5Q9H339 312 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 PIGUQ9H490 435 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 B3GAT2Q9NPZ5 323 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 MED17Q9NVC6 651 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 KNL1Q8NG31 2342 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 C7orf66A4D0T2 115 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 B8ZZF3 427 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 H0Y8X5 98 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 IGHA1P01876 353 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 PSKH1P11801 424 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 SLC6A1P30531 599 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 NBL1P41271 181 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 MTNR1AP48039 350 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 CTSCP53634 463 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 CLDN2P57739 230 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 TAP2Q03519 686 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 AGERQ15109 404 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 RPS26P11Q5JNZ5 115 aaPredicted RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 ACSM5Q6NUN0 579 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 C9orf62Q8N4C0 152 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 TP53I13Q8NBR0 393 aaPredicted RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 OR4K5Q8NGD3 323 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 OR5H6Q8NGV6 325 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 ASB12Q8WXK4 309 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 SMPDL3AQ92484 453 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 PIGKQ92643 395 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 DCLRE1CQ96SD1 692 aaKnown RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 ANKRD19PQ9H560 264 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 PILRBQ9UKJ0 227 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 EXOGQ9Y2C4 368 aaKnown RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 PI4KAP42356 2102 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 NINQ8N4C6 2090 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 LOC105371267A0A1B0GV96 52 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 LINC00854A0A1B0GVQ3 168 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 OR2AG2A6NM03 316 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 PRAMEF26H0Y7S4 382 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 CASC3O15234 703 aaKnown RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 PDPK1O15530 556 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 TGFB1P01137 390 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 PREPP48147 710 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 BTBD16Q32M84 506 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 LCTLQ6UWM7 567 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 LYPD8Q6UX82 237 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 PAMR1Q6UXH9 720 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 TMIGD1Q6UXZ0 262 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 C6orf120Q7Z4R8 191 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 FAM129CQ86XR2 697 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 NUS1Q96E22 293 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 RNFT2Q96EX2 444 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 TMEM121BQ9BXQ6 578 aaPredicted RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 PITHD1Q9GZP4 211 aaPredicted RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 SLAMF7Q9NQ25 335 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 P2RX2Q9UBL9 471 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 SEC14L3Q9UDX4 400 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 ELF5Q9UKW6 265 aaPredicted RBP19.21■□□□□ 0.67
SNX3-201ENST00000230085 SH2B3Q9UQQ2 575 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 SLC9A8Q9Y2E8 581 aa19.21■□□□□ 0.67
SNX3-201ENST00000230085 POM121BA6NF01 834 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 WASHC1A8K0Z3 465 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 AKAP8O43823 692 aaKnown RBP19.2■□□□□ 0.66
SNX3-201ENST00000230085 NOS1APO75052 506 aaPredicted RBP19.2■□□□□ 0.66
SNX3-201ENST00000230085 SH3BGRLO75368 114 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 TNNI3P19429 210 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 ATP12AP54707 1039 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 SHC2P98077 582 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 IRF4Q15306 451 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 SMUG1Q53HV7 270 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 ZBTB37Q5TC79 503 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 CDH24Q86UP0 819 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 BBS10Q8TAM1 723 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 RFKQ969G6 155 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 BMFQ96LC9 184 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 CAMK1GQ96NX5 476 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 TREX2Q9BQ50 279 aaPredicted RBP19.2■□□□□ 0.66
SNX3-201ENST00000230085 RIOK2Q9BVS4 552 aaKnown RBP19.2■□□□□ 0.66
SNX3-201ENST00000230085 C1QTNF7Q9BXJ2 289 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 BEX2Q9BXY8 128 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 MVB12BQ9H7P6 319 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 ADAM29Q9UKF5 820 aa19.2■□□□□ 0.66
SNX3-201ENST00000230085 INMT-MINDY4F8WBC2 141 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 K7ESM1 405 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 UBXN7O94888 489 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 PCCBP05166 539 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 CD53P19397 219 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 AKT2P31751 481 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 IFNGR2P38484 337 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 ARFIP1P53367 373 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 TMEM115Q12893 351 aaPredicted RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 PLA1AQ53H76 456 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 SLC27A4Q6P1M0 643 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 DEF8Q6ZN54 512 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 RASSF6Q6ZTQ3 369 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 BCDIN3DQ7Z5W3 292 aaKnown RBP19.19■□□□□ 0.66
SNX3-201ENST00000230085 KRT78Q8N1N4 520 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 SYT14Q8NB59 555 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 TM4SF18Q96CE8 201 aa19.19■□□□□ 0.66
SNX3-201ENST00000230085 LINC00615Q96LM1 132 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms