RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 OR7A10O76100 309 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 PVRP15151 417 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 ETV5P41161 510 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 SRP9P49458 86 aaKnown RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 ETV1P50549 477 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 POU6F2P78424 691 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 IFITM3Q01628 133 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 ARFRP1Q13795 201 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 EXOSC7Q15024 291 aaKnown RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 TTLL10Q6ZVT0 673 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF101Q8IZC7 436 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 CAMKVQ8NCB2 501 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 RNASE11Q8TAA1 199 aaKnown RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 THAP3Q8WTV1 239 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 SMPDL3BQ92485 455 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 SLC7A6Q92536 515 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 YIPF6Q96EC8 236 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 C7orf34Q96L11 122 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 RANBP3Q9H6Z4 567 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-201ENST00000226574 MVB12BQ9H7P6 319 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF226Q9NYT6 803 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 LIPT1Q9Y234 373 aa12.93□□□□□ -0.34
NFKB1-201ENST00000226574 SLC22A31A6NKX4 558 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 M0R082 166 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ARPC1BO15143 372 aaKnown RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 KLK8O60259 260 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SPDEFO95238 335 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 HRGP04196 525 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 PSMA3P25788 255 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SLC6A11P48066 632 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TIAL1Q01085 375 aaKnown RBP eCLIP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SMAD2Q15796 467 aaKnown RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 GXYLT1Q4G148 440 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TCEAL5Q5H9L2 206 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ENTPD8Q5MY95 495 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ATCAYQ86WG3 371 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 OR52I1Q8NGK6 324 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ADAMTS19Q8TE59 1207 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 C1QTNF3Q9BXJ4 246 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 PCDHGB1Q9Y5G3 927 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF670-ZNF695F2Z2N8 137 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 KCNK2O95069 426 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TACSTD2P09758 323 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SLC1A3P43003 542 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SNTA1Q13424 505 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM31Q5JXX7 168 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 LRFN4Q6PJG9 635 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 COMMD7Q86VX2 200 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 BCL7CQ8WUZ0 217 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TANKQ92844 425 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM185BQ9H7F4 350 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TREM1Q9NP99 234 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TAS2R3Q9NYW6 316 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 NOX1Q9Y5S8 564 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 CEP250Q9BV73 2442 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TVP23AA6NH52 213 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 MRPS14O60783 128 aaKnown RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 IL1AP01583 271 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ARSBP15848 533 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 CXCR1P25024 350 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 CCR6P51684 374 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ESPNLQ6ZVH7 1005 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SETD6Q8TBK2 473 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF582Q96NG8 517 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 SLC38A3Q99624 504 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 CTRCQ99895 268 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 RAB11FIP5Q9BXF6 653 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 POLDIP3Q9BY77 421 aaKnown RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 Q9N2J8 555 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 IER3IP1Q9Y5U9 82 aa12.92□□□□□ -0.34
NFKB1-201ENST00000226574 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-201ENST00000226574 A0A0G2JMP0 313 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 A0A0X1KG70 313 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SCO1O75880 301 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SPARCP09486 303 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 PRKACBP22694 351 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 HTR3AP46098 478 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 RAB12Q6IQ22 244 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 PRSS45Q7RTY3 260 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ASPGQ86U10 573 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SDR16C5Q8N3Y7 309 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 OR4M2Q8NGB6 313 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 SLC22A18Q96BI1 424 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 RETREG1Q9H6L5 497 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 MBD1Q9UIS9 605 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ACSL5Q9ULC5 683 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 INSL6Q9Y581 213 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM221A6NGB7 291 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ANKRD61A6NGH8 418 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 ACOD1A6NK06 481 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 JUNDP17535 347 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 TGM1P22735 817 aa12.91□□□□□ -0.34
NFKB1-201ENST00000226574 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms