RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 LMAN2Q12907 356 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 POM121L1PQ3SYA9 428 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 EOGTQ5NDL2 527 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 OSTF1Q92882 214 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 YIPF5Q969M3 257 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 NARS2Q96I59 477 aaKnown RBP13.33□□□□□ -0.27
SHPK-201ENST00000225519 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 QRSL1Q9H0R6 528 aaKnown RBP13.33□□□□□ -0.27
SHPK-201ENST00000225519 SLC6A15Q9H2J7 730 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 CFAP97Q9P2B7 532 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 KCNMB2Q9Y691 235 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 TCRBV16S1A1N1A0A5B0 115 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 J3QLW9 94 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 ALPPL2P10696 532 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 NPPBP16860 134 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 ZNF19P17023 458 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 HLA-FP30511 346 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 AHRP35869 848 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 SLC36A2Q495M3 483 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 PLBD1Q6P4A8 553 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 CD300LDQ6UXZ3 194 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 OR5W2Q8NH69 310 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 F2RL3Q96RI0 385 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 DPYSL5Q9BPU6 564 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 WDR26Q9H7D7 661 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.28
SHPK-201ENST00000225519 PLXNA3P51805 1871 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 MANSC4A6NHS7 340 aaPredicted RBP13.33□□□□□ -0.28
SHPK-201ENST00000225519 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.28
SHPK-201ENST00000225519 REM1O75628 298 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 MRPL3P09001 348 aaKnown RBP13.33□□□□□ -0.28
SHPK-201ENST00000225519 TSPAN31Q12999 210 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 TRAM2Q15035 370 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 RTN4RL1Q86UN2 441 aaPredicted RBP13.33□□□□□ -0.28
SHPK-201ENST00000225519 KLK6Q92876 244 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 ARMC5Q96C12 935 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 SEC22CQ9BRL7 303 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.28
SHPK-201ENST00000225519 ARL6Q9H0F7 186 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 OR51V1Q9H2C8 321 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 TRIOBPQ9H2D6 2365 aa13.33□□□□□ -0.28
SHPK-201ENST00000225519 ARPC1BO15143 372 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 ARPC5O15511 151 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 ERAL1O75616 437 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 RP2O75695 350 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 UBL3O95164 117 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 FGBP02675 491 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 WNT1P04628 370 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 PRG2P13727 222 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 POU3F2P20265 443 aaPredicted RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 RAB3BP20337 219 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 CD70P32970 193 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 PIP5KL1Q5T9C9 394 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 NXPE4Q6UWF7 544 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 TAS1R1Q7RTX1 841 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 COMTD1Q86VU5 262 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 TRAPPC5Q8IUR0 188 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 ALG14Q96F25 216 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 BBS4Q96RK4 519 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 MED20Q9H944 212 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 RCE1Q9Y256 329 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 FXYD6-FXYD2A0A087WZ82 144 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 ZC3H12DA2A288 527 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 GRM7Q14831 915 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 LASP1Q14847 261 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 UBE2Q1Q7Z7E8 422 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 MORN4Q8NDC4 146 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 OR10Z1Q8NGY1 313 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 LYSMD1Q96S90 227 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 IFT27Q9BW83 186 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 TTTY10Q9BZA0 68 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 FXYD6Q9H0Q3 95 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 MAN2C1Q9NTJ4 1040 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 KCMF1Q9P0J7 381 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 NFKBIL1Q9UBC1 381 aaPredicted RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 PRKAG2Q9UGJ0 569 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 FBXL2Q9UKC9 423 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 ACAD8Q9UKU7 415 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 LRFN2Q9ULH4 789 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 COPS3Q9UNS2 423 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 SIRT4Q9Y6E7 314 aaPredicted RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 DRD2P14416 443 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 NFYAP23511 347 aaPredicted RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 GDNFP39905 211 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 GCGRP47871 477 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 SLC11A1P49279 550 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
SHPK-201ENST00000225519 LGALS3BPQ08380 585 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 NDUFAF5Q5TEU4 345 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 SYT9Q86SS6 491 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 SIRT6Q8N6T7 355 aa13.32□□□□□ -0.28
SHPK-201ENST00000225519 SLC22A12Q96S37 553 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms