RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MED11Q9P086 117 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 PPP4R1LQ9P1A2 415 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 BTNL2Q9UIR0 455 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 DCTN4Q9UJW0 460 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 ACAD8Q9UKU7 415 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 MEMO1Q9Y316 297 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 C15orf38-AP3S2A0A0A6YYH1 394 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 OR14I1A6ND48 311 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 GMFGO60234 142 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 CBR3O75828 277 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 OXSR1O95747 527 aaPredicted RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 IL6P05231 212 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 KRT16P08779 473 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 CD1EP15812 388 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 RNF144AP50876 292 aaPredicted RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 POLR2JP52435 117 aaKnown RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 ADORA2A-AS1P86434 159 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 GUCY1A3Q02108 690 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 TIGD2Q4W5G0 525 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 DCST2Q5T1A1 773 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 SAXO2Q658L1 398 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 ZNF585AQ6P3V2 769 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 TNFAIP8L2Q6P589 184 aaPredicted RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 BHLHB9Q6PI77 547 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 DNAJC14Q6Y2X3 702 aaPredicted RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 ZNF621Q6ZSS3 439 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 OLIG3Q7RTU3 272 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 MARVELD2Q8N4S9 558 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 OR4K17Q8NGC6 315 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 GOT1L1Q8NHS2 421 aaPredicted RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 DUSP19Q8WTR2 217 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 VPS33AQ96AX1 596 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 SARAFQ96BY9 339 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 PANX1Q96RD7 426 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 TBL1XR1Q9BZK7 514 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 MED4Q9NPJ6 270 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 SLC6A13Q9NSD5 602 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 ALKBH4Q9NXW9 302 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 SUCOQ9UBS9 1254 aaKnown RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 ABCG2Q9UNQ0 655 aa11.54□□□□□ -0.56
LSM5-201ENST00000223084 NCOA6Q14686 2063 aaPredicted RBP11.54□□□□□ -0.56
LSM5-201ENST00000223084 FAM234BA2RU67 622 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 BCKDKO14874 412 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 CLDN1O95832 211 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 ANGPTL1O95841 491 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 OR12D1P0DN82 309 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 BMP7P18075 431 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 CHI3L1P36222 383 aaPredicted RBP11.53□□□□□ -0.56
LSM5-201ENST00000223084 CLK3P49761 638 aaKnown RBP11.53□□□□□ -0.56
LSM5-201ENST00000223084 STX1BP61266 288 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 CRYZQ08257 329 aaKnown RBP11.53□□□□□ -0.56
LSM5-201ENST00000223084 DCST1Q5T197 706 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 WLSQ5T9L3 541 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 HIST2H2BCQ6DN03 193 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 ARFGAP2Q8N6H7 521 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 FADS6Q8N9I5 356 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 OR2M3Q8NG83 312 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 OR14L1PQ8NHC6 308 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 ITLN2Q8WWU7 325 aaPredicted RBP11.53□□□□□ -0.56
LSM5-201ENST00000223084 RAB8BQ92930 207 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 NEURL3Q96EH8 262 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 DMRTA2Q96SC8 542 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 G6PC3Q9BUM1 346 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 OR2B2Q9GZK3 357 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 FGFR1OP2Q9NVK5 253 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 TAS2R10Q9NYW0 307 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 DKKL1Q9UK85 242 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 RPH3AQ9Y2J0 694 aaPredicted RBP11.53□□□□□ -0.56
LSM5-201ENST00000223084 PHF3Q92576 2039 aaKnown RBP11.53□□□□□ -0.56
LSM5-201ENST00000223084 TEX15Q9BXT5 2789 aa11.53□□□□□ -0.56
LSM5-201ENST00000223084 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.56
LSM5-201ENST00000223084 A0A0G2JND7 137 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 ALG1L2C9J202 215 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 E9PLN8 166 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 NR5A2O00482 541 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 RFXANKO14593 260 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 ATP8B1O43520 1251 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 ZIC3O60481 467 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 HPGDP15428 266 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 ATP6V1C1P21283 382 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 TBXA2RP21731 343 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 DPP4P27487 766 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 SRD5A2P31213 254 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 MRPL19P49406 292 aaKnown RBP11.52□□□□□ -0.57
LSM5-201ENST00000223084 CD226Q15762 336 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 GTDC1Q4AE62 458 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 RTL6Q6ICC9 239 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 MRGPRGQ86SM5 289 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 RNF130Q86XS8 419 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 FUNDC1Q8IVP5 155 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 PNPT1Q8TCS8 783 aaKnown RBP11.52□□□□□ -0.57
LSM5-201ENST00000223084 MIPOL1Q8TD10 442 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 XAGE5Q8WWM1 108 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 ABTB1Q969K4 478 aaPredicted RBP11.52□□□□□ -0.57
LSM5-201ENST00000223084 SDF2Q99470 211 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 TIMP4Q99727 224 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 KLHDC3Q9BQ90 382 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 VKORC1Q9BQB6 163 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 UGT2B28Q9BY64 529 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms