RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CNIH4Q9P003 139 aa10.48□□□□□ -0.73
KNOP1-201ENST00000219837 RHBDD3Q9Y3P4 386 aa10.48□□□□□ -0.73
KNOP1-201ENST00000219837 LOC102725191A0A1B0GVB3 256 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MEIS3P1A6NDR6 274 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 HMX3A6NHT5 357 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 TMX2-CTNND1H3BSU7 103 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 M0R3H8 397 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MAP2K3P46734 347 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 PTPRRQ15256 657 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 WDR53Q7Z5U6 358 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 SLC2A12Q8TD20 617 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 TXNDC15Q96J42 360 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 SYT3Q9BQG1 590 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 PBDC1Q9BVG4 233 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 HAPLN2Q9GZV7 340 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MMP27Q9H306 513 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ZNF443Q9Y2A4 671 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 PIGBOS1A0A0B4J2F0 54 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ENSAO43768 121 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 IL7P13232 177 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 IL4RP24394 825 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DEFB103AP81534 67 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DCAF12Q5T6F0 453 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ASRGL1Q7L266 308 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DCP2Q8IU60 420 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MCATQ8IVS2 390 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 OR5L1Q8NGL2 311 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DCUN1D4Q92564 292 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 TSPAN10Q9H1Z9 355 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 USP36Q9P275 1121 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MYH3P11055 1940 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 RGPD2P0DJD1 1756 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 CASC3O15234 703 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 LILRB3O75022 631 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 CD46P15529 392 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 XCR1P46094 333 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ARSDP51689 593 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ADARB1P78563 741 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 GALNT1Q10472 559 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 EXOSC7Q15024 291 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ZNF791Q3KP31 576 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MEX3BQ6ZN04 569 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 KANSL1Q7Z3B3 1105 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MSI2Q96DH6 328 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MALSU1Q96EH3 234 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 NMNAT1Q9HAN9 279 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MKS1Q9NXB0 559 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 LRIT1Q9P2V4 623 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 PCTPQ9UKL6 214 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 SLC6A14Q9UN76 642 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 NOTOA8MTQ0 251 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MMP2P08253 660 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DBHP09172 617 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 GMPRP36959 345 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 RAB6CQ53S08 254 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 NADSYN1Q6IA69 706 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 SIAH1Q8IUQ4 282 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 NAGSQ8N159 534 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 NPWQ8N729 165 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 OR51L1Q8NGJ5 315 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 SLC12A9Q9BXP2 914 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 RAB6CQ9H0N0 254 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 HEBP1Q9NRV9 189 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DECR2Q9NUI1 292 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 OR6C6A6NF89 314 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MT-CO2P00403 227 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 LAMP1P11279 417 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 MSR1P21757 451 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 LTC4SQ16873 150 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 CMTM1Q8IZ96 169 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 TOMM40LQ969M1 308 aa10.47□□□□□ -0.73
KNOP1-201ENST00000219837 FUBP1Q96AE4 644 aaKnown RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 ZMYND19Q96E35 227 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 DPCDQ9BVM2 203 aaPredicted RBP10.47□□□□□ -0.73
KNOP1-201ENST00000219837 CACNA1FO60840 1977 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 JRKO75564 520 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 GJA5P36382 358 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 HTR3AP46098 478 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 MTNR1AP48039 350 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 ALDH3B2P48448 385 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.73
KNOP1-201ENST00000219837 CHRNEQ04844 493 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 OR56B2PQ8NGI1 322 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 OR51Q1Q8NH59 317 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 SYNPRQ8TBG9 265 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 UBXN10Q96LJ8 280 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 ALG8Q9BVK2 526 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 CARD8Q9Y2G2 431 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 CREBL2O60519 120 aaPredicted RBP10.46□□□□□ -0.73
KNOP1-201ENST00000219837 CHMP24386 653 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 ZNF136P52737 540 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 RBM12BQ8IXT5 1001 aaKnown RBP10.46□□□□□ -0.73
KNOP1-201ENST00000219837 MARVELD2Q8N4S9 558 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 OR9Q2Q8NGE9 314 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 NUDT22Q9BRQ3 303 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 SLC25A18Q9H1K4 315 aa10.46□□□□□ -0.73
KNOP1-201ENST00000219837 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms