RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 SLC38A6Q8IZM9 456 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 ZBTB8AQ96BR9 441 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 RRAGCQ9HB90 399 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 PCDHGA2Q9Y5H1 932 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 GLOD5A6NK44 160 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 ZNF726A6NNF4 738 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SLC43A1O75387 559 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 RDH16O75452 317 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 MAKP20794 623 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 CCKBRP32239 447 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 ARL2P36404 184 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 CDKN2DP55273 166 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SERINC3Q13530 473 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 NOXRED1Q6NXP6 359 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SIAH3Q8IW03 269 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 HHLA1C9JL84 531 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 M0R2N6 131 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 HLA-DMAP28067 261 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 CALCRP30988 508 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 ZNF808Q8N4W9 903 aaPredicted RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 ZNF611Q8N823 705 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 NECAP1Q8NC96 275 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 PARP12Q9H0J9 701 aaKnown RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 NQO2P16083 231 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 GAB1Q13480 694 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SLC6A17Q9H1V8 727 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 FAM212BQ9NTI7 297 aaPredicted RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 RIF1Q5UIP0 2472 aaKnown RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 B4GALT4O60513 344 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 PTAFRP25105 342 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 AK4P27144 223 aaPredicted RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 NSG1P42857 185 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 RPL23AP62750 156 aaKnown RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 TNK1Q13470 666 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 GPR176Q14439 515 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 TECRLQ5HYJ1 363 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 TOP6BLQ8N6T0 577 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 FNDC9Q8TBE3 224 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SETD7Q8WTS6 366 aaKnown RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 FAM46BQ96A09 425 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 MEPEQ9NQ76 525 aaPredicted RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 CXXC1Q9P0U4 656 aaPredicted RBP10.51□□□□□ -0.73
USP31-201ENST00000219689 MYO18BQ8IUG5 2567 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 RNF13O43567 381 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 DCTP40126 519 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 SORT1Q99523 831 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 NFAT5O94916 1531 aa10.51□□□□□ -0.73
USP31-201ENST00000219689 HAS3O00219 553 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 ZNF41P51814 821 aaPredicted RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 ZXDBP98169 803 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 THOC6Q86W42 341 aaKnown RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 ZNF382Q96SR6 550 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 ADAP2Q9NPF8 381 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 PCBP1Q15365 356 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP31-201ENST00000219689 DDOQ99489 341 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 PIGMQ9H3S5 423 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 TMEM100Q9NV29 134 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 ARHGAP32A7KAX9 2087 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 CNTNAP1P78357 1384 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 PHRF1Q9P1Y6 1649 aaKnown RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 RPS26P11Q5JNZ5 115 aaPredicted RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 ENPP7Q6UWV6 458 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 MBOAT1Q6ZNC8 495 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 ZNF561Q8N587 486 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 OR52E2Q8NGJ4 325 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 OR8J1Q8NGP2 316 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 DUSP19Q8WTR2 217 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 CD244Q9BZW8 370 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 TANC2Q9HCD6 1990 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 NDUFS4O43181 175 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 HOXB5P09067 269 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 SLC35E2BP0CK96 405 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 GNSP15586 552 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 GCGRP47871 477 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 CDKN1CP49918 316 aaPredicted RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 MITD1Q8WV92 249 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 EFCAB11Q9BUY7 163 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 WASF3Q9UPY6 502 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 ANK1P16157 1881 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 PHOX2AO14813 284 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 TMEM220Q6QAJ8 160 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 TMEM121BQ9BXQ6 578 aaPredicted RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 LRRK1Q38SD2 2015 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 NPIPA2E9PIF3 369 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 NPIPA3F8WFD2 350 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 SLC10A3P09131 477 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 QDPRP09417 244 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 MAT2AP31153 395 aaKnown RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 ASPAP45381 313 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 KIF25Q9UIL4 384 aa10.5□□□□□ -0.73
USP31-201ENST00000219689 SRP9P49458 86 aaKnown RBP10.5□□□□□ -0.73
USP31-201ENST00000219689 SNTB1Q13884 538 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms