RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 OR51E2Q9H255 320 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 DSN1Q9H410 356 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 A4GALTQ9NPC4 353 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 CLEC2DQ9UHP7 191 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 NAALAD2Q9Y3Q0 740 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 H0YC42 278 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 WWP2O00308 870 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 RDH16O75452 317 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 IGHV4-34P06331 123 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 GADD45AP24522 165 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 GRK5P34947 590 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 UGT2B15P54855 530 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TMBIM6P55061 237 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 CDC42P60953 191 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 DOC2BQ14184 412 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 OXA1LQ15070 435 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ZNF124Q15973 351 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 FCRL6Q6DN72 434 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 RRM2BQ7LG56 351 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 SLC34A3Q8N130 599 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 DNAJC22Q8N4W6 341 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TMEM105Q8N8V8 129 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 OR9A4Q8NGU2 314 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 RHOXF1Q8NHV9 184 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 WDR36Q8NI36 951 aaKnown RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 ZNF420Q8TAQ5 688 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 SLC35A4Q96G79 324 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 SECISBP2Q96T21 854 aaKnown RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 NELL2Q99435 816 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TINAGL1Q9GZM7 467 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ACSS1Q9NUB1 689 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 HCN3Q9P1Z3 774 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ENPP5Q9UJA9 477 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 CAB39Q9Y376 341 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 A8MV72 311 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 OR7A10O76100 309 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ST6GAL1P15907 406 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 PCSK2P16519 638 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ZNF3P17036 446 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 JUNBP17275 347 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 ITIH1P19827 911 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 GPR4P46093 362 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 KHKP50053 298 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 GABARAPL2P60520 117 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ABATP80404 500 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 PRR5P85299 388 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 HHEXQ03014 270 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 EOGTQ5NDL2 527 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 KRT77Q7Z794 578 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ASB12Q8WXK4 309 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TP53INP1Q96A56 240 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 DMRTB1Q96MA1 342 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 OR2A5Q96R48 311 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 PSD2Q9BQI7 771 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 EHD3Q9NZN3 535 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 HEBP2Q9Y5Z4 205 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 FAM170BA6NMN3 283 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 TLR4O00206 839 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 SSX5O60225 188 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 GMFGO60234 142 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 ZIC2O95409 532 aaPredicted RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 TNFP01375 233 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 FHP07954 510 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 JUNDP17535 347 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 MMP11P24347 488 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 AHRP35869 848 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 HTR2BP41595 481 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 AKR1D1P51857 326 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 ARFIP1P53367 373 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 CDC73Q6P1J9 531 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 CASP12Q6UXS9 341 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 ZER1Q7Z7L7 766 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 TMEM203Q969S6 136 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 DNAJA3Q96EY1 480 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 FAM46AQ96IP4 442 aaKnown RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 TUBA1CQ9BQE3 449 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 C6orf62Q9GZU0 229 aaPredicted RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 LMAN1LQ9HAT1 526 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 C3orf14Q9HBI5 128 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 ACAD8Q9UKU7 415 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 A4GNTQ9UNA3 340 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 SLC9A8Q9Y2E8 581 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 PCDH15Q96QU1 1955 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 A0A0A6YYC8 382 aaPredicted RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 CLCA1A8K7I4 914 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 EFCAB9A8MZ26 197 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 I3L1I5 382 aaPredicted RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 B3GALT2O43825 422 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 FGF17O60258 216 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 PDE9AO76083 593 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 S100A6P06703 90 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 TRHRP34981 398 aaPredicted RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 SOX3P41225 446 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 RGS8P57771 180 aaPredicted RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 MRM1Q6IN84 353 aaKnown RBP9.3□□□□□ -0.92
USP11-201ENST00000218348 PGBD2Q6P3X8 592 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 NKAIN4Q8IVV8 208 aa9.3□□□□□ -0.92
USP11-201ENST00000218348 GALNT12Q8IXK2 581 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms