RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF836Q6ZNA1 936 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZAR1Q86SH2 424 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TMEM151BQ8IW70 566 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SPARTQ8N0X7 666 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TAGAPQ8N103 731 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF321PQ8N8H1 164 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 BMPERQ8N8U9 685 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OR9Q2Q8NGE9 314 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SLC13A4Q9UKG4 626 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 HCN4Q9Y3Q4 1203 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CLCA3PQ9Y6N3 262 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NPIPA5A0A0B4J1W7 369 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 EFCAB7A8K855 629 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NPIPA7E9PJI5 369 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NPIPA8P0DM63 369 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ELAVL4P26378 380 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RPS6KA3P51812 740 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SLC37A1P57057 533 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 LARS2Q15031 903 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 AGBL5Q8NDL9 886 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CTRCQ99895 268 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ITPAQ9BY32 194 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RXFP3Q9NSD7 469 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 KLHL28Q9NXS3 571 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TRIM64BA6NI03 449 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 BCKDKO14874 412 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TPST2O60704 377 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 UGT2B17O75795 530 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SEC14L2O76054 403 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 H1F0P07305 194 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FGF5P12034 268 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RFX3P48380 749 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CLK3P49761 638 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 EEF1A1P68104 462 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IL18R1Q13478 541 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IL11RAQ14626 422 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NNATQ16517 81 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FGD3Q5JSP0 725 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SHISA6Q6ZSJ9 500 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OR7G1Q8NGA0 311 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PRRC1Q96M27 445 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PSD2Q9BQI7 771 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OR8D2Q9GZM6 311 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CACYBPQ9HB71 228 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 POLE3Q9NRF9 147 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF232Q9UNY5 417 aa18.23■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IGKV1D-16P01601 117 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IGKV3-11P04433 115 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DBIP07108 87 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZGLP1P0C6A0 271 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CYP4B1P13584 511 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CD59P13987 128 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 EPHA2P29317 976 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TRHRP34981 398 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 GABARAPL2P60520 117 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CDK5R2Q13319 367 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 BPHLQ86WA6 291 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CNIH3Q8TBE1 160 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SLC7A13Q8TCU3 470 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SLC2A12Q8TD20 617 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PMM1Q92871 262 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DCUN1D5Q9BTE7 237 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RIBC2Q9H4K1 309 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 Q9N2J8 555 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CTPS2Q9NRF8 586 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PAK1IP1Q9NWT1 392 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PRODH2Q9UF12 536 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ARRDC5A6NEK1 342 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SLC1A7O00341 560 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DYRK3O43781 588 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CCNB2O95067 398 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DDAH2O95865 285 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 HBQ1P09105 142 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF806P0C7X5 589 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ANXA8P13928 327 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NID1P14543 1247 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DCDP81605 110 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SEC23BQ15437 767 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FLYWCH1Q4VC44 716 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 GTF2IRD2BQ6EKJ0 949 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF770Q6IQ21 691 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 LANCL3Q6ZV70 420 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 GTF2IRD2Q86UP8 949 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZSCAN1Q8NBB4 408 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PLPP5Q8NEB5 264 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 C7orf57Q8NEG2 295 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NIPSNAP1Q9BPW8 284 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PRR14Q9BWN1 585 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 LHPPQ9H008 270 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 MAN2C1Q9NTJ4 1040 aa18.22■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CUL9Q8IWT3 2517 aa18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 A0A1W2PRQ8 180 aa18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 POLR1CO15160 346 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RGS8P57771 180 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OCA2Q04671 838 aa18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DGCR6Q14129 220 aa18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF721Q8TF20 911 aa18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FUZQ9BT04 418 aa18.21■□□□□ 0.51
TNFRSF1A-201ENST00000162749 UGT2B11O75310 529 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ONECUT2O95948 504 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms