RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ZNF438Q7Z4V0 828 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 MCATQ8IVS2 390 aaKnown RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 NANOGP1Q8N7R0 232 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF614Q8N883 585 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 OR2T33Q8NG76 320 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 OR52L1Q8NGH7 329 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 OR52I1Q8NGK6 324 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 DOK4Q8TEW6 326 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM255BQ8WV15 326 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 RLN3Q8WXF3 142 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 RNFT2Q96EX2 444 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 SLC38A3Q99624 504 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 LMAN1LQ9HAT1 526 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 CAPN10Q9HC96 672 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 FAM60AQ9NP50 221 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 MED17Q9NVC6 651 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 CLEC2DQ9UHP7 191 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 NTNG1Q9Y2I2 539 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 EXOSC1Q9Y3B2 195 aaKnown RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 TDRD6O60522 2096 aaKnown RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 SCN2AQ99250 2005 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 LILRA5A6NI73 299 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SAGE2PA6NJ88 616 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SLC9B1P1A6NJY1 282 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 TAF4O00268 1085 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CHST10O43529 356 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PIP5K1CO60331 668 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 BRINP1O60477 761 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SRPX2O60687 465 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 FMO6PO60774 539 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 MED26O95402 600 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PROS1P07225 676 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ADRA2AP08913 450 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NME1P15531 152 aaKnown RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ENDOUP21128 410 aaKnown RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CD27P26842 260 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CD38P28907 300 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 GCGRP47871 477 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 FASLGP48023 281 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 MTNR1AP48039 350 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 RFX3P48380 749 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CDH11P55287 796 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 MAP4K2Q12851 820 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SSX1Q16384 188 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 FLYWCH1Q4VC44 716 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 EXOSC6Q5RKV6 272 aaKnown RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 C19orf48Q6RUI8 117 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 BTLAQ7Z6A9 289 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 MRGPREQ86SM8 312 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ATCAYQ86WG3 371 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CACTIN-AS1Q8N1I8 211 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 FAM160A2Q8N612 972 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CLDN22Q8N7P3 220 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ANKK1Q8NFD2 765 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 OR52R1Q8NGF1 315 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 OR8D4Q8NGM9 314 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 FANK1Q8TC84 345 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 LMX1AQ8TE12 382 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 HHATLQ9HCP6 504 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NDUFB11Q9NX14 153 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SOHLH2Q9NX45 425 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CA14Q9ULX7 337 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 STUB1Q9UNE7 303 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SSR3Q9UNL2 185 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 MRPS17Q9Y2R5 130 aaKnown RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 GPR52Q9Y2T5 361 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PEX16Q9Y5Y5 336 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 A0A0A6YYC8 382 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NPIPA5A0A0B4J1W7 369 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CENPVL1A0A0U1RR11 272 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PNMA8CA0A1B0GUJ8 204 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CDHR4A6H8M9 788 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 KDM4EB2RXH2 506 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NPIPA7E9PJI5 369 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 I3L1I5 382 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PEX12O00623 359 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CLDN4O14493 209 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NKX2-2O95096 273 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CSF2P04141 144 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 HMGN1P05114 100 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 HNRNPCP07910 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CT62P0C5K7 136 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 TSPAN19P0C672 248 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 NPIPA8P0DM63 369 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF136P52737 540 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 PPP5CP53041 499 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 WNT4P56705 351 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 UBXN2BQ14CS0 331 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 OR1Q1Q15612 314 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SOWAHCQ53LP3 525 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-201ENST00000054666 RPL13AP3Q6NVV1 102 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 SLC30A6Q6NXT4 461 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF554Q86TJ5 538 aa7.68□□□□□ -1.18
VAMP3-201ENST00000054666 CDK20Q8IZL9 346 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms