RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FAM155AB1AL88 458 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 B4GALT5O43286 388 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 DPM1O60762 260 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 OSMP13725 252 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CKMT2P17540 419 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 UBE2NP61088 152 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GRM7Q14831 915 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MANEAQ5SRI9 462 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 LBX2Q6XYB7 198 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 KDM8Q8N371 416 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 C15orf54Q8N8G6 183 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 C1orf127Q8N9H9 656 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 KDF1Q8NAX2 398 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CD200R1Q8TD46 325 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PPP4R1LQ9P1A2 415 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ADAM29Q9UKF5 820 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CLEC4EQ9ULY5 219 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CRYBG1Q9Y4K1 1723 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 M0R2N6 131 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SURF4O15260 269 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FADS1O60427 444 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SLC22A5O76082 557 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ORM1P02763 201 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 C6P13671 934 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 AKR1C4P17516 323 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 BCKDHBP21953 392 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HMGCLP35914 325 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PCLAFQ15004 111 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PAGE3Q5JUK9 113 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SLX4IPQ5VYV7 408 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 NDUFAF7Q7L592 441 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF598Q86UK7 904 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SNX29P2Q8IUI4 249 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GCNT2Q8N0V5 402 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PSMG2Q969U7 264 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 UQCC2Q9BRT2 126 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 RDH14Q9HBH5 336 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CRLF2Q9HC73 371 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PPP1R14DQ9NXH3 145 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF226Q9NYT6 803 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MOKQ9UQ07 419 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CASP8AP2Q9UKL3 1982 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 BRCA1P38398 1863 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SLC22A23A1A5C7 686 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 RAB5AP20339 215 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HIST1H1TP22492 207 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 EIF1P41567 113 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MC2RQ01718 297 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MLLT11Q13015 90 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 RIN1Q13671 783 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GANABQ14697 944 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS3Q14952 304 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 C6orf136Q5SQH8 315 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM198Q66K66 360 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CDRT4Q8N9R6 151 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ZFP90Q8TF47 636 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MITD1Q8WV92 249 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM203Q969S6 136 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TIMM13Q9Y5L4 95 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HEMK1Q9Y5R4 338 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SIPA1L3O60292 1781 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SSX5O60225 188 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SNAP29O95721 258 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MT-CYBP00156 380 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PRKACBP22694 351 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SIRPB2Q5JXA9 342 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PSD2Q9BQI7 771 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GAREM1Q9H706 876 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FBXL12Q9NXK8 326 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TESQ9UGI8 421 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 KCNS2Q9ULS6 477 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PKDREJQ9NTG1 2253 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PLSCR5A0PG75 271 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SLC38A8A6NNN8 435 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SLC1A7O00341 560 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ST8SIA5O15466 376 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ANGPTL7O43827 346 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SRPX2O60687 465 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 NDUFB2O95178 105 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 DPEP1P16444 411 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MOGSQ13724 837 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SYT6Q5T7P8 510 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM200AQ86VY9 491 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FAM129CQ86XR2 697 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 NAT6Q93015 286 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ARHGAP39Q9C0H5 1083 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FZD8Q9H461 694 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ZDHHC7Q9NXF8 308 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MCTS1Q9ULC4 181 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PCDHA9Q9Y5H5 950 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 RIF1Q5UIP0 2472 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ABCA3Q99758 1704 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 E5RGE8 158 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 LYRM1O43325 122 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NUDT21O43809 227 aaKnown RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 TOX4O94842 621 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 IL1RNP18510 177 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 NRG1Q02297 640 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-201ENST00000011700 CNKSR3Q6P9H4 555 aa5.76□□□□□ -1.49
VPS13D-201ENST00000011700 UMODL1-AS1Q8N2C9 162 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms