RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm17078M0QW51 211 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Pdlim3O70209 316 aaKnown RBP10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Klrg1O88713 188 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Kcne1P23299 129 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Il1r2P27931 410 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Ceacam1P31809 521 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Cd63P41731 238 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Upp1P52624 311 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Tgm3Q08189 693 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Eml4Q3UMY5 988 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Nlrc3Q5DU56 1064 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Taar2Q5QD17 339 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Dvl2Q60838 736 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Zbtb46Q8BID6 600 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Chrnb3Q8BMN3 464 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Ssuh2Q8C3L1 340 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 FgbQ8K0E8 481 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Colec12Q8K4Q8 742 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Ceacam2Q925P2 520 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Ncbp2Q9CQ49 156 aaKnown RBP10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Naalad2Q9CZR2 740 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 4933421I07RikQ9D420 214 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Hipk2Q9QZR5 1196 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Khdrbs2Q9WU01 349 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Cytl1A1E5L0 139 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Zyg11aA2BFL2 627 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Spats1A2RRY8 269 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Sac3d1A6H687 427 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Vmn1r20K7N778 303 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Slc22a1O08966 556 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Cyp2j5O54749 501 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 SmsP97355 366 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Il12rb2P97378 874 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Trappc13Q3TIR1 417 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 SypQ62277 314 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Otop2Q80SX5 563 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Poldip3Q8BG81 420 aaKnown RBP10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Kctd7Q8BJK1 289 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Gen1Q8BMI4 908 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Lypd4Q8BVP6 246 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 NdnfQ8C119 568 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Wdr26Q8C6G8 641 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Glipr1Q9CWG1 255 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Cmtm8Q9CZR4 173 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Plekhj1Q9D240 164 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Mrps33Q9D2R8 106 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr938Q9EQ93 315 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 PrknQ9WVS6 464 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Eml5Q8BQM8 1977 aa10.89□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr1034A0A1L1ST14 310 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Gm13271B1AYH9 182 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 ChadlE9Q7T7 748 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Nfatc1O88942 717 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 AcadmP45952 421 aaKnown RBP10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Tmem64Q3U145 381 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Smarcd3Q6P9Z1 483 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Tas2r104Q7M723 302 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr1140Q7TR39 311 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr598Q7TRR2 319 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Acat3Q80X81 397 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Znf689Q8BKK5 500 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Catsper4Q8BVN3 442 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Gramd1cQ8CI52 457 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Agpat4Q8K4X7 378 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 NagsQ8R4H7 527 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr668Q8VGW3 318 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Klhl22Q99JN2 634 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 2200002D01RikQ9D809 114 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Tor3aQ9ER38 385 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Ca7Q9ERQ8 264 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Mapk9Q9WTU6 423 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr172E9Q8F6 309 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Fzd1O70421 642 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Gm45902Q3UDN3 361 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Zswim9Q6DI92 447 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 SelenoiQ80TA1 398 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Rhbdd3Q8BP97 385 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Fam69cQ8BQT2 410 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Neu4Q8BZL1 478 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 CipcQ8R0W1 432 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Plet1Q8VEN2 237 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr474Q8VFC9 310 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Mrgprb5Q91ZB9 322 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 CenpvQ9CXS4 252 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 MtpapQ9D0D3 585 aaKnown RBP10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 IqchQ9D2K4 1071 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 PaicsQ9DCL9 425 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 B3galt5Q9JI67 308 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 BC025446A0A087WQT1 134 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 IghdA0A0A6YW14 291 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Olfr1366A0A1W2P740 328 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Cyp2d37-psF6YKB5 150 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Gm3755K7N743 167 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 TrhrP21761 393 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Guca1aP43081 202 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Fam109bQ14B98 259 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Mfsd2bQ3T9M1 494 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Pea15Q62048 130 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Arhgef39Q66JY6 344 aa10.88□□□□□ -0.67
Col9a1-202ENSMUST00000088349 Znf182Q6P560 627 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms