RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CNPPD1Q9BV87 410 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 SEC16AO15027 2179 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 SH3PXD2BA1X283 911 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 OR2W5A6NFC9 320 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 DYRK3O43781 588 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 KCNK2O95069 426 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 CCDC159P0C7I6 412 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 CKMT1AP12532 417 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 POU2F1P14859 743 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 TNNI3P19429 210 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 DUSP3P51452 185 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-216ENST00000641375 PGDP52209 483 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 CXCR4P61073 352 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 FOXD4Q12950 439 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-216ENST00000641375 SEC23BQ15437 767 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 CLPPQ16740 277 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-216ENST00000641375 CCDC92Q53HC0 331 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-216ENST00000641375 PRAMEF17Q5VTA0 474 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF836Q6ZNA1 936 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 NCCRP1Q6ZVX7 275 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-216ENST00000641375 CLIP4Q8N3C7 705 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 GTPBP3Q969Y2 492 aaKnown RBP15.27■□□□□ 0.04
PHGDH-216ENST00000641375 OR10A5Q9H207 317 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 ANKRD19PQ9H560 264 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 ERVK-19Q9WJR5 959 aa15.27■□□□□ 0.04
PHGDH-216ENST00000641375 ANGPTL1O95841 491 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 NID1P14543 1247 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 UGT2B15P54855 530 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 EEF1A1P68104 462 aaKnown RBP15.26■□□□□ 0.03
PHGDH-216ENST00000641375 ST3GAL3Q11203 375 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 PROX2Q3B8N5 592 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 MFSD4BQ5TF39 518 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 FIGNL1Q6PIW4 674 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 OR7G1Q8NGA0 311 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-216ENST00000641375 C17orf50Q8WW18 174 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 DGCR6LQ9BY27 220 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 SLC7A5P2Q9GIP4 190 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 Q9N2J8 555 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 PRODH2Q9UF12 536 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 GPR55Q9Y2T6 319 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-216ENST00000641375 PCDHGA6Q9Y5G7 932 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 VPS13AQ96RL7 3174 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 IGHV5-10-1A0A0J9YXX1 117 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 GXYLT2A0PJZ3 443 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 C17orf105B2RV13 164 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 HRKO00198 91 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 SLC1A7O00341 560 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 HYAL3O43820 417 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-216ENST00000641375 GGT2P36268 569 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 ALDH3B2P48448 385 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 DAB2P98082 770 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 MINDY4Q4G0A6 757 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 ARHGAP40Q5TG30 622 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 BROXQ5VW32 411 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 ZNF773Q6PK81 442 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 KLHL17Q6TDP4 642 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 IFI44Q8TCB0 444 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 SLC38A4Q969I6 547 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 EVA1AQ9H8M9 152 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 MKKSQ9NPJ1 570 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-216ENST00000641375 MAN2C1Q9NTJ4 1040 aa15.26■□□□□ 0.03
PHGDH-216ENST00000641375 IGKV3D-11A0A0A0MRZ8 115 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 SYNDIG1LA6NDD5 238 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 TPST2O60704 377 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 SP9P0CG40 484 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 TRHRP34981 398 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 DCTN2Q13561 401 aaKnown RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 MAD2L1BPQ15013 274 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 PODNL1Q6PEZ8 512 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 RANBP3LQ86VV4 465 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 DEPDC4Q8N2C3 294 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 OR2I1PQ8NGU4 316 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 C16orf52Q8NHV5 167 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 CNIH3Q8TBE1 160 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 G6PC3Q9BUM1 346 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 UCK2Q9BZX2 261 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 POLR2J2Q9GZM3 115 aaKnown RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 POLR2J3Q9H1A7 115 aaKnown RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 SYNDIG1Q9H7V2 258 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 FBXO34Q9NWN3 711 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 hCG_2014768A0A024R1R8 64 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 FRS3O43559 492 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 CYP7B1O75881 506 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 AGXTP21549 392 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 COX10Q12887 443 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 TARDBPQ13148 414 aaKnown RBP eCLIP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 TRAM2Q15035 370 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 MAPK14Q16539 360 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 FLYWCH1Q4VC44 716 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 ENTPD8Q5MY95 495 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 LAIR2Q6ISS4 152 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 PGBD2Q6P3X8 592 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 BORAQ6PGQ7 559 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 ZNF615Q8N8J6 731 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 TOR1AIP2Q8NFQ8 470 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 DIO2Q92813 273 aa15.25■□□□□ 0.03
PHGDH-216ENST00000641375 NMD3Q96D46 503 aaKnown RBP15.25■□□□□ 0.03
PHGDH-216ENST00000641375 GTPBP2Q9BX10 602 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms