RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RNF113BQ8IZP6 322 aaKnown RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 HS3ST5Q8IZT8 346 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 SLC43A2Q8N370 569 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF615Q8N8J6 731 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 OR6T1Q8NGN1 323 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 VANGL1Q8TAA9 524 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ADAMTS16Q8TE57 1224 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 FBLIM1Q8WUP2 373 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 METTL21AQ8WXB1 218 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 CLIP3Q96DZ5 547 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 SENP5Q96HI0 755 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 FEVQ99581 238 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF559Q9BR84 538 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 TEX12Q9BXU0 123 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 RBCK1Q9BYM8 510 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 FAM117AQ9C073 453 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ARRDC1-AS1Q9H2J1 176 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 RIBC2Q9H4K1 309 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 WDR54Q9H977 334 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 NECTIN3Q9NQS3 549 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 SCN3BQ9NY72 215 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 DHCR7Q9UBM7 475 aaKnown RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 CBLCQ9ULV8 474 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 A4GNTQ9UNA3 340 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ERVK-19Q9WJR5 959 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 TPRKBQ9Y3C4 175 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 OR10H1Q9Y4A9 318 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 TMEM184BQ9Y519 407 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 MAGED1Q9Y5V3 778 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 KCNE3Q9Y6H6 103 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 MAU2Q9Y6X3 613 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ASCC3Q8N3C0 2202 aaKnown RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 RALGAPA1Q6GYQ0 2036 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 SH3PXD2BA1X283 911 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TRAPPC13A5PLN9 417 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 CDHR4A6H8M9 788 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 PRAMEF25A6NGN4 478 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TRIM64CA6NLI5 447 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 EFCAB7A8K855 629 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 PATE3B3GLJ2 98 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 E9PQ18 207 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 M0R3H8 397 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TO15178 435 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 OR10H3O60404 316 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 NME6O75414 186 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 CDC123O75794 336 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 CYP7B1O75881 506 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 IGKV3-11P04433 115 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 KLK3P07288 261 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 ZNF806P0C7X5 589 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 OSMP13725 252 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TNFRSF1BP20333 461 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 PRKACGP22612 351 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 KRT20P35900 424 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 ADH7P40394 386 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 PGDP52209 483 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 CDC42P60953 191 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 BTG2P78543 158 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 IL1RL1Q01638 556 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 MC2RQ01718 297 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 NSDHLQ15738 373 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 SYT16Q17RD7 645 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 ZNF613Q6PF04 617 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 RBM44Q6ZP01 1051 aaKnown RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 PLEKHM3Q6ZWE6 761 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 VRK2Q86Y07 508 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 SLC5A8Q8N695 610 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 METTL27Q8N6F8 245 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 AQP11Q8NBQ7 271 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 OR1N1Q8NGS0 311 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 C16orf52Q8NHV5 167 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 STT3BQ8TCJ2 826 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 GNPDA2Q8TDQ7 276 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 RHBDD1Q8TEB9 315 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TRUB1Q8WWH5 349 aaKnown RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 IPCEF1Q8WWN9 437 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 ACOT11Q8WXI4 607 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 DIO2Q92813 273 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TP53INP1Q96A56 240 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 HSPBAP1Q96EW2 488 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 LCORQ96JN0 433 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 HS6ST2Q96MM7 605 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 MUS81Q96NY9 551 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 MCHR1Q99705 422 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 CMKLR1Q99788 373 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 UCK2Q9BZX2 261 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TRIM2Q9C040 744 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 IRF2BPLQ9H1B7 796 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TMEM27Q9HBJ8 222 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 PNO1Q9NRX1 252 aaKnown RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 MKLN1Q9UL63 735 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 TMEM5Q9Y2B1 443 aa9.02□□□□□ -0.97
PHGDH-215ENST00000641371 GPR55Q9Y2T6 319 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-215ENST00000641371 C2orf92A0A1B0GVN3 265 aa9.01□□□□□ -0.97
PHGDH-215ENST00000641371 VSTM2BA6NLU5 285 aa9.01□□□□□ -0.97
PHGDH-215ENST00000641371 C9J4A7 227 aa9.01□□□□□ -0.97
PHGDH-215ENST00000641371 TGFBR3LH3BV60 316 aa9.01□□□□□ -0.97
PHGDH-215ENST00000641371 J3KTA2 159 aa9.01□□□□□ -0.97
PHGDH-215ENST00000641371 FFAR1O14842 300 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms