RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TNFRSF10DQ9UBN6 386 aa24.35■■□□□ 1.49
VEGFA-231ENST00000640499 PCDHGB4Q9UN71 923 aa24.35■■□□□ 1.49
VEGFA-231ENST00000640499 WIF1Q9Y5W5 379 aa24.35■■□□□ 1.49
VEGFA-231ENST00000640499 MYO7BQ6PIF6 2116 aa24.35■■□□□ 1.49
VEGFA-231ENST00000640499 TRGV8A0A0C4DH27 118 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 AGFG2O95081 481 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 KCNH1O95259 989 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 LDLRP01130 860 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 IL6P05231 212 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 HPNP05981 417 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 UQCRC2P22695 453 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 GDF1P27539 372 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 PTGS2P35354 604 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 MASP1P48740 699 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 CASP9P55211 416 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.34■■□□□ 1.491e-17■■■□□ 17
VEGFA-231ENST00000640499 EMC4Q5J8M3 183 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 SAXO2Q658L1 398 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 OR5M10Q6IEU7 315 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 CGB2Q6NT52 195 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 ARHGAP11AQ6P4F7 1023 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 COX18Q8N8Q8 333 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 OR1J4Q8NGS1 313 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 DCTN4Q9UJW0 460 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 FBXL2Q9UKC9 423 aa24.34■■□□□ 1.49
VEGFA-231ENST00000640499 MRTO4Q9UKD2 239 aaKnown RBP24.34■■□□□ 1.49
VEGFA-231ENST00000640499 FAF1Q9UNN5 650 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-231ENST00000640499 ELAVL4P26378 380 aaKnown RBP24.33■■□□□ 1.49
VEGFA-231ENST00000640499 POLR2JP52435 117 aaKnown RBP24.33■■□□□ 1.49
VEGFA-231ENST00000640499 MARCH3Q86UD3 253 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 FJX1Q86VR8 437 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 FAM57AQ8TBR7 257 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 PHF12Q96QT6 1004 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 CCDC134Q9H6E4 229 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 SLC52A3Q9NQ40 469 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 SH3BGRL2Q9UJC5 107 aa24.33■■□□□ 1.49
VEGFA-231ENST00000640499 DOPEY2Q9Y3R5 2298 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 AQP7O14520 342 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 SCO2O43819 266 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 SUSD5O60279 629 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 HCN1O60741 890 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 GSNP06396 782 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 ABOP16442 354 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 MATN1P21941 496 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 TRPC1P48995 793 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 POU6F2P78424 691 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-231ENST00000640499 PLCZ1Q86YW0 608 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 MIPOL1Q8TD10 442 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 ADAMTS15Q8TE58 950 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 VPS33AQ96AX1 596 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 NEURL3Q96EH8 262 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 ZNF385DQ9H6B1 395 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 B4GALT7Q9UBV7 327 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 ABCG2Q9UNQ0 655 aa24.32■■□□□ 1.48
VEGFA-231ENST00000640499 DIDO1Q9BTC0 2240 aaKnown RBP24.32■■□□□ 1.48
VEGFA-231ENST00000640499 TRGV5A0A0B4J1U4 118 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 A0A1B0GUH1 482 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 FAM234BA2RU67 622 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 CCDC154A6NI56 674 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 PSMD4P55036 377 aaKnown RBP24.31■■□□□ 1.48
VEGFA-231ENST00000640499 EIPR1Q53HC9 387 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 BHLHB9Q6PI77 547 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 NEIL3Q8TAT5 605 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 SLC35G5Q96KT7 338 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 PANX1Q96RD7 426 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 SLC35A5Q9BS91 424 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 FGFR1OP2Q9NVK5 253 aa24.31■■□□□ 1.48
VEGFA-231ENST00000640499 MED12Q93074 2177 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 NPIPA2E9PIF3 369 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 NPIPA3F8WFD2 350 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 CCL21O00585 134 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 TRAPPC6AO75865 159 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 OXSR1O95747 527 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-231ENST00000640499 NGFRP08138 427 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 TBXA2RP21731 343 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 TIGD2Q4W5G0 525 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 DCST2Q5T1A1 773 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 C3P1Q6ZMU1 363 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 NCCRP1Q6ZVX7 275 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-231ENST00000640499 OLIG3Q7RTU3 272 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 FADS6Q8N9I5 356 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 FAM83FQ8NEG4 500 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-231ENST00000640499 SSC4DQ8WTU2 575 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 CHMP6Q96FZ7 201 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 OR51I1Q9H343 314 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 LDAHQ9H6V9 325 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 PNPLA3Q9NST1 481 aa24.3■■□□□ 1.48
VEGFA-231ENST00000640499 UTP20O75691 2785 aaKnown RBP24.3■■□□□ 1.48
VEGFA-231ENST00000640499 PRAMEF27A3QJZ7 478 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 CBR3O75828 277 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 TPOP07202 933 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 KRT16P08779 473 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 MDH1P40925 334 aaKnown RBP24.29■■□□□ 1.48
VEGFA-231ENST00000640499 ATP4BP51164 291 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 GXYLT1Q4G148 440 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 WIPI1Q5MNZ9 446 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-231ENST00000640499 BLOC1S3Q6QNY0 202 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 YRDCQ86U90 279 aaKnown RBP24.29■■□□□ 1.48
VEGFA-231ENST00000640499 CD163Q86VB7 1156 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 DUSP19Q8WTR2 217 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms