RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RNFT1Q5M7Z0 435 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 HEPHL1Q6MZM0 1159 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 C16orf62Q7Z3J2 963 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
GTF3A-209ENST00000640289 OR4C3Q8NH37 302 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 DNAJB8Q8NHS0 232 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 RNF138Q8WVD3 245 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 NTNG2Q96CW9 530 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 JSRP1Q96MG2 331 aaPredicted RBP12.09□□□□□ -0.47
GTF3A-209ENST00000640289 FRMD6Q96NE9 622 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 ANKRD27Q96NW4 1050 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 LRRC37BQ96QE4 947 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 FAM173AQ9BQD7 235 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 CPPED1Q9BRF8 314 aaPredicted RBP12.09□□□□□ -0.47
GTF3A-209ENST00000640289 DOHHQ9BU89 302 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 G6PC3Q9BUM1 346 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 OSBPL11Q9BXB4 747 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 RTN4RQ9BZR6 473 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 ASF1BQ9NVP2 202 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 HRH3Q9Y5N1 445 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 SPENQ96T58 3664 aaKnown RBP12.08□□□□□ -0.48
GTF3A-209ENST00000640289 NBEAQ8NFP9 2946 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ANKRD33BA6NCL7 494 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ADAM10O14672 748 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 GNB5O14775 395 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 AIM2O14862 343 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 HS6ST1O60243 411 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 TRIM3O75382 744 aaPredicted RBP12.08□□□□□ -0.48
GTF3A-209ENST00000640289 WISP2O76076 250 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 OXSR1O95747 527 aaPredicted RBP12.08□□□□□ -0.48
GTF3A-209ENST00000640289 AGR2O95994 175 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 AK1P00568 194 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ATP6V1C1P21283 382 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 EVI2BP34910 448 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 CPA2P48052 419 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 RNF144AP50876 292 aaPredicted RBP12.08□□□□□ -0.48
GTF3A-209ENST00000640289 DSTNP60981 165 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 FOXO1Q12778 655 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 GPR68Q15743 365 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 MAPK11Q15759 364 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 INAQ16352 499 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 GPAT3Q53EU6 434 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ATAD3BQ5T9A4 648 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 FNDC7Q5VTL7 733 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 TMEM81Q6P7N7 255 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 FAM180AQ6UWF9 173 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 APOOLQ6UXV4 268 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 PRICKLE2Q7Z3G6 844 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 MARCH3Q86UD3 253 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ZFP62Q8NB50 900 aaPredicted RBP12.08□□□□□ -0.48
GTF3A-209ENST00000640289 POGLUT1Q8NBL1 392 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 CPT1CQ8TCG5 803 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 LRRC58Q96CX6 371 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 TTTY12Q9BZ98 90 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ZNF350Q9GZX5 532 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 ARL8BQ9NVJ2 186 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 MKLN1Q9UL63 735 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 GMEB1Q9Y692 573 aa12.08□□□□□ -0.48
GTF3A-209ENST00000640289 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.08□□□□□ -0.48
GTF3A-209ENST00000640289 CENPVL1A0A0U1RR11 272 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 FAM166BA8MTA8 275 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 TNFRSF21O75509 655 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 STX11O75558 287 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 H6PDO95479 791 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 BCHEP06276 602 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 CHRM4P08173 479 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 RFPL3SP0C7P2 107 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 GPX2P18283 190 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 PPIBP23284 216 aaKnown RBP12.07□□□□□ -0.48
GTF3A-209ENST00000640289 PRDX6P30041 224 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 DCTP40126 519 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 ATRXP46100 2492 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 ANXA11P50995 505 aaKnown RBP12.07□□□□□ -0.48
GTF3A-209ENST00000640289 GAS1P54826 345 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 TXNL4AP83876 142 aaKnown RBP12.07□□□□□ -0.48
GTF3A-209ENST00000640289 PLGLB1Q02325 96 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 FADDQ13158 208 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 FLYWCH1Q4VC44 716 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 RABL3Q5HYI8 236 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 TBCELQ5QJ74 424 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 TYW3Q6IPR3 259 aaKnown RBP12.07□□□□□ -0.48
GTF3A-209ENST00000640289 NANOGP8Q6NSW7 305 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 SLC30A6Q6NXT4 461 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 FRRS1Q6ZNA5 592 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 HMGN2P46Q86SG4 172 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 GATSQ8NAP1 163 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 PCYOX1LQ8NBM8 494 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 MAL2Q969L2 176 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 CMTM5Q96DZ9 223 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 TMEM41AQ96HV5 264 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 THUMPD3Q9BV44 507 aaKnown RBP12.07□□□□□ -0.48
GTF3A-209ENST00000640289 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
GTF3A-209ENST00000640289 RUBCNLQ9H714 662 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 NANOGQ9H9S0 305 aa12.07□□□□□ -0.48
GTF3A-209ENST00000640289 KCNE5Q9UJ90 142 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms