RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 RAD1O60671 282 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 NDUFB2O95178 105 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 PTH2RP49190 550 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 CDRT4Q8N9R6 151 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 OR5H2Q8NGV7 314 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 METTL2AQ96IZ6 378 aaKnown RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 USP36Q9P275 1121 aaKnown RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 A0A0A6YYC8 382 aaPredicted RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 OTOL1A6NHN0 477 aaPredicted RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 I3L1I5 382 aaPredicted RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 HTR3BO95264 441 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 PNMTP11086 282 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 DDCP20711 480 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 MAOBP27338 520 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 DEFB103AP81534 67 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 PPA1Q15181 289 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 PRSS48Q7RTY5 328 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 MEX3DQ86XN8 651 aaKnown RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 CBARPQ8N350 705 aaPredicted RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 KDM1BQ8NB78 822 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 MAFAQ8NHW3 353 aaPredicted RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 ZMYND19Q96E35 227 aaPredicted RBP13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 KLHL15Q96M94 604 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 RGCCQ9H4X1 137 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
HNRNPU-226ENST00000640218 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 YY2O15391 372 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 FRS3O43559 492 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 AMY2AP04746 511 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 MFSD13AQ14CX5 517 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 NPRL2Q8WTW4 380 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 ZNF649Q9BS31 505 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 NPR2P20594 1047 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 PRPS1P60891 318 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 MANEAQ5SRI9 462 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 PIANPQ8IYJ0 282 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 YARS2Q9Y2Z4 477 aaKnown RBP13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 PTGER1P34995 402 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 CCBE1Q6UXH8 406 aaPredicted RBP13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 GSG1LQ6UXU4 331 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 DTWD1Q8N5C7 304 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 OR52E1Q8NGJ3 308 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 LHPPQ9H008 270 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 B3GALT1Q9Y5Z6 326 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 CSNK1G3Q9Y6M4 447 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 LCATP04180 440 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 DPPA4Q7L190 304 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 NANOS1Q8WY41 292 aaKnown RBP13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 SPTSSAQ969W0 71 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 PINK1Q9BXM7 581 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 CD93Q9NPY3 652 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 RAC2P15153 192 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 ZNF28P17035 718 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 PBX2P40425 430 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 PRKXP51817 358 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 TP53I3Q53FA7 332 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 CPOQ8IVL8 374 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 VWA5B2Q8N398 1253 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 SYT14Q8NB59 555 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 FAM71F1Q96KD3 344 aaPredicted RBP13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 ALG8Q9BVK2 526 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 CDH20Q9HBT6 801 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 ACOT13Q9NPJ3 140 aa13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.18
HNRNPU-226ENST00000640218 RNASET2O00584 256 aaKnown RBP13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 FGF4P08620 206 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 CD79AP11912 226 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 PCGF2P35227 344 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 FOLR3P41439 243 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 AKR1C2P52895 323 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 CDK3Q00526 305 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 FGL1Q08830 312 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 MFSD6LQ8IWD5 586 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 OR51T1Q8NGJ9 327 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 C16orf58Q96GQ5 468 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 ENTPD2Q9Y5L3 495 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 LRRC37A3O60309 1634 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 ANTXRLA6NF34 631 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 SDR39U1Q9NRG7 319 aaPredicted RBP13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 BTNL2Q9UIR0 455 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 TRAV18A0A075B6X5 111 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 A0A1B0GV50 99 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 ZNF33BQ06732 778 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 NADSYN1Q6IA69 706 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 DPCDQ9BVM2 203 aaPredicted RBP13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 NAALAD2Q9Y3Q0 740 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 HMX3A6NHT5 357 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 C12orf71A8MTZ7 269 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 CD34P28906 385 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 ARG2P78540 354 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 HNRNPA1L2Q32P51 320 aaKnown RBP13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 ACOT4Q8N9L9 421 aa13.89□□□□□ -0.19
HNRNPU-226ENST00000640218 CACNG6Q9BXT2 260 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms