RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KLHL1Q9NR64 748 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 CNIH4Q9P003 139 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 P2RX2Q9UBL9 471 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 LIPT1Q9Y234 373 aa14.69□□□□□ -0.06
CLN6-216ENST00000636876 KLF13Q9Y2Y9 288 aaPredicted RBP14.69□□□□□ -0.06
CLN6-216ENST00000636876 ICOSLGO75144 302 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 UTS2O95399 124 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 P04436 131 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 NUDT7P0C024 238 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 ESRRAP11474 423 aaPredicted RBP14.68□□□□□ -0.06
CLN6-216ENST00000636876 SLC6A2P23975 617 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 MNAT1P51948 309 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 KLRB1Q12918 225 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 SYPL1Q16563 259 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 PLEKHN1Q494U1 663 aaPredicted RBP14.68□□□□□ -0.06
CLN6-216ENST00000636876 NADK2Q4G0N4 442 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 RABL3Q5HYI8 236 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 GCNT6Q5T4J0 391 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 C8orf82Q6P1X6 216 aaPredicted RBP14.68□□□□□ -0.06
CLN6-216ENST00000636876 TMEM81Q6P7N7 255 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 TEX19Q8NA77 164 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 TMEM178AQ8NBL3 297 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 RNF138Q8WVD3 245 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 TMCO6Q96DC7 493 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 TRNT1Q96Q11 434 aaKnown RBP14.68□□□□□ -0.06
CLN6-216ENST00000636876 HOPXQ9BPY8 73 aaPredicted RBP14.68□□□□□ -0.06
CLN6-216ENST00000636876 ZNF350Q9GZX5 532 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 KAT8Q9H7Z6 458 aaKnown RBP14.68□□□□□ -0.06
CLN6-216ENST00000636876 A4GALTQ9NPC4 353 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 POLE3Q9NRF9 147 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 SACM1LQ9NTJ5 587 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 BSNQ9UPA5 3926 aa14.68□□□□□ -0.06
CLN6-216ENST00000636876 C15orf38-AP3S2A0A0A6YYH1 394 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 ANKRD33BA6NCL7 494 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 PRAMEF25A6NGN4 478 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 CCT8L1PA6NM43 557 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 FADS1O60427 444 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 STX11O75558 287 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 NGFRP08138 427 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 CHRM4P08173 479 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 GUSBP08236 651 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 TFPTP0C1Z6 253 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 NR2F1P10589 423 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 CNR1P21554 472 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 CASP3P42574 277 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 MAPK11Q15759 364 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 GRAMD1BQ3KR37 738 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 GPAT3Q53EU6 434 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 BICRALQ6AI39 1079 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 OLIG3Q7RTU3 272 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 GALNTL5Q7Z4T8 443 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 ARPINQ7Z6K5 226 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 ANKFN1Q8N957 763 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 GRHL3Q8TE85 626 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 METTL7AQ9H8H3 244 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 PROK2Q9HC23 129 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 DEPPQ9NTK1 212 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 FLRT3Q9NZU0 649 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 WDR45Q9Y484 360 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 PCDHGA10Q9Y5H3 936 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 EML6Q6ZMW3 1958 aa14.67□□□□□ -0.06
CLN6-216ENST00000636876 A0A0G2JMM0 328 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 A0A1W2PPB8 328 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 A0A1W2PRS3 328 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 TMEM247A6NEH6 219 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 KIR3DP1A8MWS1 328 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 G3V3Y1 287 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 SLC28A2O43868 658 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 PEX1O43933 1283 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 FCMRO60667 390 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 UBOX5O94941 541 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 H6PDO95479 791 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 BCHEP06276 602 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 T-ENOLP0DO92 83 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 ARAFP10398 606 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 CALB2P22676 271 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 EVI2BP34910 448 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 PSME3P61289 254 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 HPCAP84074 193 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 SNTA1Q13424 505 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 ADRM1Q16186 407 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 CYP51A1Q16850 503 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 FLYWCH1Q4VC44 716 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 TBCELQ5QJ74 424 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 PRAMEF20Q5VT98 475 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 AP1ARQ63HQ0 302 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 RPUSD3Q6P087 351 aaKnown RBP14.66□□□□□ -0.06
CLN6-216ENST00000636876 FRRS1Q6ZNA5 592 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 LRRC74BQ6ZQY2 392 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 NET1Q7Z628 596 aaPredicted RBP14.66□□□□□ -0.06
CLN6-216ENST00000636876 PTRH1Q86Y79 214 aaKnown RBP14.66□□□□□ -0.06
CLN6-216ENST00000636876 PTOV1Q86YD1 416 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 SULF2Q8IWU5 870 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 Q8NA96 180 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 OR4C3Q8NH37 302 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 OR10A6Q8NH74 314 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 FBXO27Q8NI29 283 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 SLC38A5Q8WUX1 472 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
CLN6-216ENST00000636876 NTNG2Q96CW9 530 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms