RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PCTPQ9UKL6 214 aa18.01■□□□□ 0.47
TARDBP-228ENST00000629725 STX2P32856 288 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 PSG6Q00889 435 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 NAB1Q13506 487 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 CPEB4Q17RY0 729 aaKnown RBP eCLIP18■□□□□ 0.47
TARDBP-228ENST00000629725 SH2D4BQ5SQS7 431 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 DNM1P46Q6ZS02 220 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 SAMD14Q8IZD0 417 aaPredicted RBP18■□□□□ 0.47
TARDBP-228ENST00000629725 C1orf52Q8N6N3 182 aaKnown RBP18■□□□□ 0.47
TARDBP-228ENST00000629725 OR4F6Q8NGB9 312 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 FBF1Q8TES7 1133 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 SELENOMQ8WWX9 145 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 NSUN5Q96P11 429 aaKnown RBP18■□□□□ 0.47
TARDBP-228ENST00000629725 RTN4RQ9BZR6 473 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 DPH5Q9H2P9 285 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 NMRK1Q9NWW6 199 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 FLRT3Q9NZU0 649 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 SENP1Q9P0U3 644 aa18■□□□□ 0.47
TARDBP-228ENST00000629725 MCTS1Q9ULC4 181 aaKnown RBP18■□□□□ 0.47
TARDBP-228ENST00000629725 A0A096LPK6 155 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 A0A1W2PP18 115 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 PLOD3O60568 738 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 IGHV4-39P01824 125 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 CD3EP07766 207 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 CTAGE8P0CG41 777 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 CLK3P49761 638 aaKnown RBP17.99■□□□□ 0.47
TARDBP-228ENST00000629725 MRPS25P82663 173 aaKnown RBP17.99■□□□□ 0.47
TARDBP-228ENST00000629725 ZNF844Q08AG5 666 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 TECRLQ5HYJ1 363 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 LGSNQ5TDP6 509 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 CTAGE4Q8IX94 777 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 EXOSC8Q96B26 276 aaKnown RBP17.99■□□□□ 0.47
TARDBP-228ENST00000629725 S100PBPQ96BU1 408 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 KCNF1Q9H3M0 494 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 ESRP2Q9H6T0 727 aaKnown RBP17.99■□□□□ 0.47
TARDBP-228ENST00000629725 GLRX2Q9NS18 164 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 PAQR5Q9NXK6 330 aaPredicted RBP17.99■□□□□ 0.47
TARDBP-228ENST00000629725 CDC42EP3Q9UKI2 254 aa17.99■□□□□ 0.47
TARDBP-228ENST00000629725 SHISA8B8ZZ34 492 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 ZNF155Q12901 538 aaPredicted RBP17.98■□□□□ 0.47
TARDBP-228ENST00000629725 ZNF672Q499Z4 452 aaPredicted RBP17.98■□□□□ 0.47
TARDBP-228ENST00000629725 CYP27C1Q4G0S4 372 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 NCMAPQ5T1S8 102 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 MARCH3Q86UD3 253 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 STEAP2Q8NFT2 490 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 OR7G2Q8NG99 324 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 OR10D3Q8NH80 312 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 HS6ST2Q96MM7 605 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 C12orf49Q9H741 205 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 NGBQ9NPG2 151 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 GIMAP4Q9NUV9 329 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 FAM120CQ9NX05 1096 aaKnown RBP17.98■□□□□ 0.47
TARDBP-228ENST00000629725 SNX6Q9UNH7 406 aa17.98■□□□□ 0.47
TARDBP-228ENST00000629725 HMX2A2RU54 273 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 STX16-NPEPL1H3BU86 382 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 STX16O14662 325 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 GMFGO60234 142 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 NDUFS7O75251 213 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 THBS1P07996 1170 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 IL3P08700 152 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 PAFAH1B1P43034 410 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 FAPQ12884 760 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 DECR1Q16698 335 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 TMEM44Q2T9K0 475 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 C6orf52Q5T4I8 152 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 NEUROG1Q92886 237 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 HBEGFQ99075 208 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 ERP44Q9BS26 406 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 HDHD5Q9BXW7 423 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 LRTM1Q9HBL6 345 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 BARX1Q9HBU1 254 aaPredicted RBP17.97■□□□□ 0.47
TARDBP-228ENST00000629725 VPS29Q9UBQ0 182 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 MCM8Q9UJA3 840 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 VDAC3Q9Y277 283 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 SNX8Q9Y5X2 465 aa17.97■□□□□ 0.47
TARDBP-228ENST00000629725 GPRIN2O60269 458 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 COQ9O75208 318 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 SYNGR4O95473 234 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 OTCP00480 354 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 TYK2P29597 1187 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 MPIP34949 423 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 C17orf67Q0P5P2 114 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 HEPACAMQ14CZ8 416 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 PGGHGQ32M88 737 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 LETMD1Q6P1Q0 360 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 CCDC25Q86WR0 208 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 WDR75Q8IWA0 830 aaKnown RBP17.96■□□□□ 0.47
TARDBP-228ENST00000629725 FAM9CQ8IZT9 166 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 MRRFQ96E11 262 aaKnown RBP17.96■□□□□ 0.47
TARDBP-228ENST00000629725 C11orf24Q96F05 449 aaPredicted RBP17.96■□□□□ 0.47
TARDBP-228ENST00000629725 RHNO1Q9BSD3 238 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 TBL1XR1Q9BZK7 514 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 VPS11Q9H270 941 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 ALG2Q9H553 416 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 SLC35C2Q9NQQ7 365 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 GDF2Q9UK05 429 aaPredicted RBP17.96■□□□□ 0.47
TARDBP-228ENST00000629725 TMCO1Q9UM00 188 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 SAR1BQ9Y6B6 198 aa17.96■□□□□ 0.47
TARDBP-228ENST00000629725 YLPM1P49750 1951 aaKnown RBP17.96■□□□□ 0.47
TARDBP-228ENST00000629725 HAX1O00165 279 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms