RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 H3BMH7 237 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 QSOX1O00391 747 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TAPBPO15533 448 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 BMP10O95393 424 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ANXA5P08758 320 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 UMPSP11172 480 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ABOP16442 354 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLC16A1P53985 500 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HSF1Q00613 529 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RPS6KA2Q15349 733 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SMU1Q2TAY7 513 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HKDC1Q2TB90 917 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 C18orf21Q32NC0 220 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLC36A3Q495N2 470 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TIGD2Q4W5G0 525 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CRB2Q5IJ48 1285 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NANOGP8Q6NSW7 305 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 B3GNT6Q6ZMB0 384 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CBR4Q8N4T8 237 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RAB42Q8N4Z0 105 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CDYL2Q8N8U2 506 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TSPAN14Q8NG11 270 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 FLVCR1-AS1Q8TAF5 88 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ADAMTS16Q8TE57 1224 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 METTL21AQ8WXB1 218 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ESAMQ96AP7 390 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 FKBP10Q96AY3 582 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RGMAQ96B86 450 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 FOPNLQ96NB1 174 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 BARD1Q99728 777 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 KCTD14Q9BQ13 255 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TMEM79Q9BSE2 394 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 C9orf16Q9BUW7 83 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 C1orf50Q9BV19 199 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RPF2Q9H7B2 306 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CNTD2Q9H8S5 307 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NANOGQ9H9S0 305 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ASIC5Q9NY37 505 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TEKT2Q9UIF3 430 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 OARD1Q9Y530 152 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SAC3D1A6NKF1 404 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 E5RI56 91 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 H0YGG7 62 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 C19orf84I3L1E1 186 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 J3KRW8 73 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SLC16A6O15403 523 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 AP2A2O94973 939 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PRSS23O95084 383 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ATP6V1B1P15313 513 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CDH2P19022 906 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 IL10P22301 178 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 FASP25445 335 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RFC3P40938 356 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 STT3AP46977 705 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ARF3P61204 181 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 TLE4Q04727 773 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 GTF2H2Q13888 395 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 DAG1Q14118 895 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 MAPKAPK3Q16644 382 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ATP6AP1LQ52LC2 224 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 GTF2H2CQ6P1K8 395 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 METTL2BQ6P1Q9 378 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SCIMPQ6UWF3 145 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 LANCL3Q6ZV70 420 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 USP51Q70EK9 711 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RIMKLAQ8IXN7 391 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CSNK1A1LQ8N752 337 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OR4F6Q8NGB9 312 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RAD51AP1Q96B01 352 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SDCCAG3Q96C92 435 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CCDC115Q96NT0 180 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 HAUS8Q9BT25 410 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ADI1Q9BV57 179 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 WDR54Q9H977 334 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 C19orf73Q9NVV2 129 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 TUBA8Q9NY65 449 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SLAMF8Q9P0V8 285 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 HCN3Q9P1Z3 774 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 GNPTGQ9UJJ9 305 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 MYRFQ9Y2G1 1151 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 MED12Q93074 2177 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PRAMEF25A6NGN4 478 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF860A6NHJ4 632 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CDC40O60508 579 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RSL1D1O76021 490 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OTCP00480 354 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 HPP00738 406 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SERPINA7P05543 415 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 GNAO1P09471 354 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 G6PDP11413 515 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 IL1RNP18510 177 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CTSSP25774 331 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SOX8P57073 446 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OR4D2P58180 307 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PLOD1Q02809 727 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RBBP5Q15291 538 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CDSNQ15517 529 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF766Q5HY98 468 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SPINK14Q6IE38 97 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms