RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MAGI1Q96QZ7 1491 aaPredicted RBP2.21□□□□□ -2.06
VBP1-204ENST00000625964 B4DXG7 233 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 PDXKO00764 312 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 ZNF861PO60384 105 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 NUMBP49757 651 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 EFNA3P52797 238 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 GNB2P62879 340 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 HERVK_113P63132 956 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 ERVK-8P63133 956 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 PRR4Q16378 134 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 SPATA46Q5T0L3 261 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 IL23RQ5VWK5 629 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 IGFL2Q6UWQ7 119 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 ERI1Q8IV48 349 aaKnown RBP2.21□□□□□ -2.06
VBP1-204ENST00000625964 RNF175Q8N4F7 328 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 ART4Q93070 314 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 C18orf25Q96B23 403 aaPredicted RBP2.21□□□□□ -2.06
VBP1-204ENST00000625964 CNPY3Q9BT09 278 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 ERVK-6Q9BXR3 956 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 PTGES2Q9H7Z7 377 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 PNO1Q9NRX1 252 aaKnown RBP2.21□□□□□ -2.06
VBP1-204ENST00000625964 GDAP2Q9NXN4 497 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 MTRRQ9UBK8 725 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 TRIM10Q9UDY6 481 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 ZNF490Q9ULM2 529 aaPredicted RBP2.21□□□□□ -2.06
VBP1-204ENST00000625964 EXOSC1Q9Y3B2 195 aaKnown RBP2.21□□□□□ -2.06
VBP1-204ENST00000625964 SOGA1O94964 1423 aa2.21□□□□□ -2.06
VBP1-204ENST00000625964 TARBP1Q13395 1621 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 DHX29Q7Z478 1369 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 SYCE3A1L190 88 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 FBLL1A6NHQ2 334 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 E9PLD3 99 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 IMPA2O14732 288 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 PPIHO43447 177 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 HTATSF1O43719 755 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 KERAO60938 352 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 ANP32DO95626 131 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 OLFM2O95897 454 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 HSPA2P54652 639 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 UCNP55089 124 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 MRPS6P82932 125 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 PLOD1Q02809 727 aaPredicted RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 UBE2V2Q15819 145 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 LRIT3Q3SXY7 679 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 LEG1Q6P5S2 330 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 ZNF562Q6V9R5 426 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 FRA10AC1Q70Z53 315 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 TRPM8Q7Z2W7 1104 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 ARFGAP2Q8N6H7 521 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 CCNYQ8ND76 341 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 NEK11Q8NG66 645 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 URGCPQ8TCY9 931 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 PSMG2Q969U7 264 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 VPS39Q96JC1 886 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 ALDH8A1Q9H2A2 487 aaPredicted RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 EHFQ9NZC4 300 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 ZNF221Q9UK13 617 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 APPL1Q9UKG1 709 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 DUSP12Q9UNI6 340 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 STRAPQ9Y3F4 350 aaKnown RBP2.2□□□□□ -2.06
VBP1-204ENST00000625964 GRIN2BQ13224 1484 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 RAD54L2Q9Y4B4 1467 aa2.2□□□□□ -2.06
VBP1-204ENST00000625964 MAPKBP1O60336 1514 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 DIP2BQ9P265 1576 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 TOP2BQ02880 1626 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 TTC26A0AVF1 554 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 PINLYPA6NC86 204 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 DHRS7CA6NNS2 312 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 TRIM49D1C9J1S8 452 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 PANO1I0J062 215 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 RAMP1O60894 148 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 JCHAINP01591 159 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 ZCCHC18P0CG32 403 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 FUT3P21217 361 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 CAV2P51636 162 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 HERPUD1Q15011 391 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 ZSWIM7Q19AV6 140 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 CCDC184Q52MB2 194 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 TEX44Q53QW1 395 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 CYBRD1Q53TN4 286 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 OR2B11Q5JQS5 317 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 TIFABQ6ZNK6 161 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 PAQR9Q6ZVX9 377 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 HSD17B13Q7Z5P4 300 aaPredicted RBP2.19□□□□□ -2.06
VBP1-204ENST00000625964 NET1Q7Z628 596 aaPredicted RBP2.19□□□□□ -2.06
VBP1-204ENST00000625964 TAF8Q7Z7C8 310 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 BBS1Q8NFJ9 593 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 RNF138Q8WVD3 245 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 TMEM80Q96HE8 168 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 NOL4LQ96MY1 436 aaPredicted RBP2.19□□□□□ -2.06
VBP1-204ENST00000625964 IL4I1Q96RQ9 567 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 ZNF184Q99676 751 aaPredicted RBP2.19□□□□□ -2.06
VBP1-204ENST00000625964 ACAT2Q9BWD1 397 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 HES7Q9BYE0 225 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 CCSER1Q9C0I3 900 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 RBM28Q9NW13 759 aaKnown RBP2.19□□□□□ -2.06
VBP1-204ENST00000625964 L3MBTL1Q9Y468 752 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 POLA1P09884 1462 aaPredicted RBP2.19□□□□□ -2.06
VBP1-204ENST00000625964 RPGRIP1LQ68CZ1 1315 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms