RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CRNNQ9UBG3 495 aaPredicted RBP11.17□□□□□ -0.62
TP53-227ENST00000622645 PHF11Q9UIL8 331 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 ARHGEF17Q96PE2 2063 aaPredicted RBP11.17□□□□□ -0.62
TP53-227ENST00000622645 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 CDC42EP2O14613 210 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 TSPAN19P0C672 248 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 CLEC2LP0C7M8 214 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 PRG2P13727 222 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 CPMP14384 443 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 CPEP16870 476 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 NDUFV2P19404 249 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 HNRNPA2B1P22626 353 aaKnown RBP11.17□□□□□ -0.62
TP53-227ENST00000622645 TLX1P31314 330 aaPredicted RBP11.17□□□□□ -0.62
TP53-227ENST00000622645 LSSP48449 732 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 RAB40BQ12829 278 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 MAPK14Q16539 360 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 ZMAT1Q5H9K5 638 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 C3orf38Q5JPI3 329 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 GDPD3Q7L5L3 318 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 LHFPL3Q86UP9 236 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 GALNT12Q8IXK2 581 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 ZFP41Q8N8Y5 198 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 TMEM52Q8NDY8 209 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 FAM3CQ92520 227 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 ARSGQ96EG1 525 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 SDF2Q99470 211 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 TM9SF2Q99805 663 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 FBXO34Q9NWN3 711 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 NTMQ9P121 344 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 PILRAQ9UKJ1 303 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 SLC7A7Q9UM01 511 aa11.17□□□□□ -0.62
TP53-227ENST00000622645 LRRC72A6NJI9 287 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 TNFSF14O43557 240 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 SLC2A10O95528 541 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 APBB3O95704 486 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 LIMS3P0CW19 117 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 LIMS4P0CW20 117 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 TPMTP51580 245 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 RPS25P62851 125 aaKnown RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 DBPQ10586 325 aaPredicted RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 DECR1Q16698 335 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 TRIM48Q8IWZ4 208 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 PEX5LQ8IYB4 626 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 GJD3Q8N144 294 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 OR4F15Q8NGB8 312 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 ASB15Q8WXK1 588 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 ASB12Q8WXK4 309 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 PIK3R3Q92569 461 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 C1GALT1C1Q96EU7 318 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 ABHD8Q96I13 439 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 EVA1BQ9NVM1 165 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 MRPS18AQ9NVS2 196 aaKnown RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 TOR4AQ9NXH8 423 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 IL20Q9NYY1 176 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 MUTYHQ9UIF7 546 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 SCML1Q9UN30 329 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 SLC22A7Q9Y694 548 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 NPIPA5A0A0B4J1W7 369 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 NPIPA7E9PJI5 369 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 H0YGG7 62 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 PTTG1O95997 202 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 GKN3PP0CG01 181 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 NPIPA8P0DM63 369 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 FPR3P25089 353 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 CDH11P55287 796 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 ARF3P61204 181 aaPredicted RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 ARHGAP11BQ3KRB8 267 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 MINDY4Q4G0A6 757 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 ZNF542PQ5EBM4 170 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 CCBE1Q6UXH8 406 aaPredicted RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 USP53Q70EK8 1073 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 SPATC1Q76KD6 591 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 SYT14Q8NB59 555 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 BBS1Q8NFJ9 593 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 TCEAL2Q9H3H9 227 aaPredicted RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 ANKRD19PQ9H560 264 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 FBRSQ9HAH7 460 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 FGF20Q9NP95 211 aaPredicted RBP11.16□□□□□ -0.62
TP53-227ENST00000622645 CSNK1G3Q9Y6M4 447 aa11.16□□□□□ -0.62
TP53-227ENST00000622645 SNTNA6NMZ2 147 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 KDM4EB2RXH2 506 aaPredicted RBP11.15□□□□□ -0.62
TP53-227ENST00000622645 SURF4O15260 269 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 FGF17O60258 216 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 SNX4O95219 450 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 MSL3P1P0C860 447 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 FUT1P19526 365 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 AZGP1P25311 298 aaKnown RBP11.15□□□□□ -0.62
TP53-227ENST00000622645 ZNF136P52737 540 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 TPTEP56180 551 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 BNC1Q01954 994 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 RUNX1T1Q06455 604 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 LARS2Q15031 903 aaKnown RBP11.15□□□□□ -0.62
TP53-227ENST00000622645 ZNF628Q5EBL2 1059 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 B3GLCTQ6Y288 498 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 Q6ZSR6 202 aa11.15□□□□□ -0.62
TP53-227ENST00000622645 MBOAT2Q6ZWT7 520 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms