RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 HOXB9P17482 250 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 LPOP22079 712 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 XPAP23025 273 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GABRA5P31644 462 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CBSP35520 551 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GDF5P43026 501 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 RFX3P48380 749 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GATMP50440 423 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CTBP2P56545 445 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 C21orf58P58505 322 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 SNRPGP62308 76 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 RBBP4Q09028 425 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ILF3Q12906 894 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PDZK1IP1Q13113 114 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PPIGQ13427 754 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GTF2H2Q13888 395 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 FAM174BQ3ZCQ3 159 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GTF2H2CQ6P1K8 395 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CD200R1LQ6Q8B3 271 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ASB18Q6ZVZ8 466 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PTCHD4Q6ZW05 846 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 LAPTM4BQ86VI4 370 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 DCUN1D3Q8IWE4 304 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 LAS2Q8IYD9 372 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ZNF527Q8NB42 609 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 FAM46DQ8NEK8 389 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 OR5M3Q8NGP4 307 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 OR6K3Q8NGY3 331 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MRPL38Q96DV4 380 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CHFRQ96EP1 664 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MS4A4EQ96PG1 132 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 DMRTA2Q96SC8 542 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 FEVQ99581 238 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MAP3K3Q99759 626 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 DUSP26Q9BV47 211 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 BOCQ9BWV1 1114 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CACNG6Q9BXT2 260 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CLMPQ9H6B4 373 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 HMX1Q9NP08 348 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 NPDC1Q9NQX5 325 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TLR8Q9NR97 1041 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ASIC5Q9NY37 505 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 RASL12Q9NYN1 266 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CFAP97Q9P2B7 532 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CA14Q9ULX7 337 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TRDV1A0A1B0GX56 115 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CARNS1A5YM72 827 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 FAM221BA6H8Z2 402 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GLTPD2A6NH11 291 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PRR23D1E9PI22 279 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TNFRSF11BO00300 401 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TCAPO15273 167 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 SIGLEC5O15389 551 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TXNL1O43396 289 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 KDELR3O43731 214 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GUCA1CO95843 209 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 KLKB1P03952 638 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 HIST1H2ABP04908 130 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ASGR1P07306 291 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 NUDT7P0C024 238 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PRR23D2P0DMB1 279 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 RPS2P15880 293 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ITGA3P26006 1051 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MST1P26927 711 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 IRS1P35568 1242 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TTPAP49638 278 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 RING1Q06587 406 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 SIGLEC14Q08ET2 396 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 HTR4Q13639 388 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 TPBGQ13641 420 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PEA15Q15121 130 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PCBP2Q15366 365 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 SPANXN4Q5MJ08 99 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 SLC22A10Q63ZE4 541 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 LYPD4Q6UWN0 246 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GLB1LQ6UWU2 654 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 C17orf99Q6UX52 265 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MBOAT1Q6ZNC8 495 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MOB3CQ70IA8 216 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 C16orf59Q7L2K0 433 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 HIST3H2AQ7L7L0 130 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ARRDC1Q8N5I2 433 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 C15orf54Q8N8G6 183 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 GNPDA2Q8TDQ7 276 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 HIST1H2ACQ93077 130 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ZC3H10Q96K80 434 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 IFT27Q9BW83 186 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 POLDIP3Q9BY77 421 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 DPY30Q9C005 99 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 ARL6Q9H0F7 186 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 DUSP15Q9H1R2 295 aaPredicted RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MAGEH1Q9H213 219 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 REEP4Q9H6H4 257 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 IPPKQ9H8X2 491 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 UNKLQ9H9P5 680 aaKnown RBP7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 CYSLTR2Q9NS75 346 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 PIPOXQ9P0Z9 390 aa7.05□□□□□ -1.28
TRIM49B-202ENST00000622138 MGAT4CQ9UBM8 478 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms