RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 HMGB1P1B2RPK0 211 aaPredicted RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 RNASET2O00584 256 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 IGKV1D-16P01601 117 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 ALOX5P09917 674 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 ALDOCP09972 364 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 KITP10721 976 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 GABRA1P14867 456 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 CLNS1AP54105 237 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 WNT3P56703 355 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 HBA1P69905 142 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 EIPR1Q53HC9 387 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 VASNQ6EMK4 673 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 OR4F3Q6IEY1 312 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 RPRMLQ8N4K4 120 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 GOLGA6L1Q8N7Z2 621 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 MAELQ96JY0 434 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 WDR55Q9H6Y2 383 aaPredicted RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 FLRT3Q9NZU0 649 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 MRPS18CQ9Y3D5 142 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 FAM215AQ9Y5M1 114 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 INTS1Q8N201 2190 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 CFLARO15519 480 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 SOX30O94993 753 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 COL8A1P27658 744 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 EPHA3P29320 983 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 LCN1P31025 176 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 SRD5A2P31213 254 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 KIR3DL1P43629 444 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 LASP1Q14847 261 aaKnown RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.66■■□□□ 1.22
PMS1-220ENST00000618056 WIPI1Q5MNZ9 446 aaPredicted RBP22.66■■□□□ 1.22
PMS1-220ENST00000618056 RTL6Q6ICC9 239 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 CDC73Q6P1J9 531 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 ACAD11Q709F0 780 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 FBXO30Q8TB52 745 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 TIMP4Q99727 224 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 SDHAF3Q9NRP4 125 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 AIG1Q9NVV5 245 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 GPATCH2Q9NW75 528 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 COQ3Q9NZJ6 369 aa22.66■■□□□ 1.22
PMS1-220ENST00000618056 SCN2BO60939 215 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 KCNK2O95069 426 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 UTS2O95399 124 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 PTGER4P35408 488 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 RFX3P48380 749 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 CLK3P49761 638 aaKnown RBP22.65■■□□□ 1.22
PMS1-220ENST00000618056 TP53BP2Q13625 1128 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 SPDYE7PQ495Y7 208 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 B3GNT6Q6ZMB0 384 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 COX18Q8N8Q8 333 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 RND1Q92730 232 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 C7orf26Q96N11 449 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 YIPF4Q9BSR8 244 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 ACTRT3Q9BYD9 372 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 PRDM14Q9GZV8 571 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 PIGUQ9H490 435 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 PPP4R1LQ9P1A2 415 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 FBXL2Q9UKC9 423 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 SLC6A5Q9Y345 797 aa22.65■■□□□ 1.22
PMS1-220ENST00000618056 DOCK7Q96N67 2140 aa22.64■■□□□ 1.22
PMS1-220ENST00000618056 GOLGA8QA0A0J9YX86 632 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 GOLGA8OA6NCC3 632 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 CYSRT1A8MQ03 144 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 B4DXG7 233 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 PRSS44E7EML9 344 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 GOLGA8NF8WBI6 632 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 SCO2O43819 266 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 CLDN14O95500 239 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 NGFRP08138 427 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 KRT16P08779 473 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 BMP7P18075 431 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 CDSNQ15517 529 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 ANXA8L1Q5VT79 327 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 OR5M10Q6IEU7 315 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 BHLHB9Q6PI77 547 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 YRDCQ86U90 279 aaKnown RBP22.64■■□□□ 1.21
PMS1-220ENST00000618056 PM20D2Q8IYS1 436 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 ULK2Q8IYT8 1036 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 CLECL1Q8IZS7 167 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 FADS6Q8N9I5 356 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 JADE3Q92613 823 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 TTYH2Q9BSA4 534 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 BTBD2Q9BX70 525 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 UGT2B28Q9BY64 529 aa22.64■■□□□ 1.21
PMS1-220ENST00000618056 PRSS51A0A1B0GVH4 220 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 ZNF195O14628 629 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 POLR3GO15318 223 aaPredicted RBP22.63■■□□□ 1.21
PMS1-220ENST00000618056 ACTL6AO96019 429 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 HCFC1P51610 2035 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 NUP107P57740 925 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 PHC1P78364 1004 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 POU6F2P78424 691 aaPredicted RBP22.63■■□□□ 1.21
PMS1-220ENST00000618056 PMPCAQ10713 525 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 ZNF630Q2M218 657 aaPredicted RBP22.63■■□□□ 1.21
PMS1-220ENST00000618056 C1orf185Q5T7R7 199 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 MAVSQ7Z434 540 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 VPS37AQ8NEZ2 397 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 ACTRT2Q8TDY3 377 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 ASB5Q8WWX0 329 aa22.63■■□□□ 1.21
PMS1-220ENST00000618056 ABTB1Q969K4 478 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms