RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 THY1P04216 161 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 RFX3P48380 749 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 EMDP50402 254 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 TEKQ02763 1124 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 MVKQ03426 396 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 ST3GAL3Q11203 375 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 EIPR1Q53HC9 387 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 SLX4IPQ5VYV7 408 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 IQCF1Q8N6M8 205 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 NR4A3Q92570 626 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 DGAT2Q96PD7 388 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 IL4I1Q96RQ9 567 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 ELF4Q99607 663 aaPredicted RBP16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 FOLH1BQ9HBA9 442 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 A8MU76 341 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 MRPS14O60783 128 aaKnown RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 OR2B3O76000 313 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 DBIP07108 87 aaKnown RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 C21orf33P30042 268 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 ARL4DP49703 201 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNF136P52737 540 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 HSD11B2P80365 405 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 PSG6Q00889 435 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNF267Q14586 743 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 MRPL2Q5T653 305 aaKnown RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 CWF19L1Q69YN2 538 aaKnown RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 CD300LDQ6UXZ3 194 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNF730Q6ZMV8 503 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 PLXDC1Q8IUK5 500 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 NKAIN4Q8IVV8 208 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 HOXB13Q92826 284 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 FKBP10Q96AY3 582 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 FKBP14Q9NWM8 211 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 DTX4Q9Y2E6 619 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 BLACEA4D250 179 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 H3BMH7 237 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 HYAL3O43820 417 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 BRINP1O60477 761 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 KCNK2O95069 426 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 AK1P00568 194 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 PRG2P13727 222 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 NID1P14543 1247 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 NR4A1P22736 598 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 PSMB9P28065 219 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 COX10Q12887 443 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 PRAMEF17Q5VTA0 474 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 C12orf73Q69YU5 71 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 TTLL10Q6ZVT0 673 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 PRICKLE2Q7Z3G6 844 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 GDF7Q7Z4P5 450 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 OR4N2Q8NGD1 307 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 SLC41A3Q96GZ6 507 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 CNPPD1Q9BV87 410 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 CUTCQ9NTM9 273 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
PCDHGC3-205ENST00000617641 SPEGQ15772 3267 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 H0YIG0 161 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 BCAS1O75363 584 aaPredicted RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 LCKP06239 509 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 GKN3PP0CG01 181 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 IFNA8P32881 189 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 OR1D4P47884 311 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ARRB1P49407 418 aaPredicted RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 PGDP52209 483 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 SLC16A12Q6ZSM3 486 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 GATAD2AQ86YP4 633 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 RAB2BQ8WUD1 216 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 MYDGFQ969H8 173 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 LMF2Q9BU23 707 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 NECTIN3Q9NQS3 549 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ETAA1Q9NY74 926 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 CNIH4Q9P003 139 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 NDOR1Q9UHB4 597 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 MPZL2O60487 215 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 CDK1P06493 297 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 STSP08842 583 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 PTNP21246 168 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ALAS2P22557 587 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ACVR2AP27037 513 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 GPR3P46089 330 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 STT3AP46977 705 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ALDH6A1Q02252 535 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 MLLT1Q03111 559 aaPredicted RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 KIF18BQ86Y91 864 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 B3GNT7Q8NFL0 401 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 FAM46AQ96IP4 442 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 YIPF2Q9BWQ6 316 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ANKRD19PQ9H560 264 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 FSCN3Q9NQT6 498 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 CLN6Q9NWW5 311 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 ERVK-19Q9WJR5 959 aa16.1■□□□□ 0.17
PCDHGC3-205ENST00000617641 TRIM64BA6NI03 449 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNF749O43361 778 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 OR5F1O95221 314 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 IGKV1D-16P01601 117 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 IFNA16P05015 189 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 FOLR1P15328 257 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 CCNA2P20248 432 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms