RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CRYBB2	P43320	205 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ANXA11	P50995	505 aa	Known RBP	13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SMS	P52788	366 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NKX2-5	P52952	324 aa	Predicted RBP	13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NUBP1	P53384	320 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	RGS8	P57771	180 aa	Predicted RBP	13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	STXBP1	P61764	594 aa	Known RBP	13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	RHAG	Q02094	409 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ATAD3B	Q5T9A4	648 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MRM1	Q6IN84	353 aa	Known RBP	13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SFTPA2	Q8IWL1	248 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	LAX1	Q8IWV1	398 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	DTX3	Q8N9I9	347 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MINDY2	Q8NBR6	621 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	OR7G2	Q8NG99	324 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PATE1	Q8WXA2	126 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	OR2M4	Q96R27	311 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TM9SF2	Q99805	663 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NXF2	Q9GZY0	626 aa	Known RBP	13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MARCH7	Q9H992	704 aa		13	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NPIPA5	A0A0B4J1W7	369 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SAGE2P	A6NJ88	616 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	GPR89A	B7ZAQ6	455 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NPIPA7	E9PJI5	369 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PIP5K1C	O60331	668 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	LDB3	O75112	727 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	KLF8	O95600	359 aa	Predicted RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	RAB36	O95755	333 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	GPR89B	P0CG08	455 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NPIPA8	P0DM63	369 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NR2F6	P10588	404 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	HOXB1	P14653	301 aa	Predicted RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	CAV3	P56539	151 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	GABRE	P78334	506 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PRKCD	Q05655	676 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ENTPD8	Q5MY95	495 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	C1orf94	Q6P1W5	598 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SYCE2	Q6PIF2	218 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PRR23C	Q6ZRP0	262 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PLEKHM3	Q6ZWE6	761 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	VN1R4	Q7Z5H5	301 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PHC2	Q8IXK0	858 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	CELF2-AS1	Q8N7Q2	184 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	OR52P1P	Q8NH57	321 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SLC30A2	Q9BRI3	323 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PINK1	Q9BXM7	581 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SMURF1	Q9HCE7	757 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ZSCAN32	Q9NX65	697 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ZNF624	Q9P2J8	865 aa	Predicted RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TMEM5	Q9Y2B1	443 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PLRG1	O43660	514 aa	Known RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ZIC2	O95409	532 aa	Predicted RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PVR	P15151	417 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MYL12A	P19105	171 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	FUT1	P19526	365 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	AHR	P35869	848 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	LIMK1	P53667	647 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TAB1	Q15750	504 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ZNF542P	Q5EBM4	170 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PRRT3	Q5FWE3	981 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MEDAG	Q5VYS4	303 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	FCRLB	Q6BAA4	426 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SLC27A4	Q6P1M0	643 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	CAMKK1	Q8N5S9	505 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MFSD9	Q8NBP5	474 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	POLDIP3	Q9BY77	421 aa	Known RBP	12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TRPV4	Q9HBA0	871 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TIGAR	Q9NQ88	270 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	OBP2A	Q9NY56	170 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	EMC3	Q9P0I2	261 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	STUB1	Q9UNE7	303 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SNX7	Q9UNH6	387 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	CHST2	Q9Y4C5	530 aa		12.99	□□□□□ -0.33
CACNA1C-231	ENST00000616390	CENPVL1	A0A0U1RR11	272 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ZSCAN5B	A6NJL1	495 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SLC2A10	O95528	541 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	POU2F2	P09086	479 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NTSR1	P30989	418 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ACSL1	P33121	698 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ATP6V1E1	P36543	226 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ABAT	P80404	500 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	FAP	Q12884	760 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SHH	Q15465	462 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ANKRD54	Q6NXT1	300 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	PLBD1	Q6P4A8	553 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	GDPD3	Q7L5L3	318 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ZNF761	Q86XN6	746 aa	Predicted RBP	12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NRROS	Q86YC3	692 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	GALNT12	Q8IXK2	581 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	NRM	Q8IXM6	262 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	UBE2J2	Q8N2K1	259 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	SYT14	Q8NB59	555 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TMEM255B	Q8WV15	326 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	MCHR1	Q99705	422 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	C1QTNF7	Q9BXJ2	289 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	BCL2L10	Q9HD36	194 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	ADAP2	Q9NPF8	381 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	TICRR	Q7Z2Z1	1910 aa		12.98	□□□□□ -0.33
CACNA1C-231	ENST00000616390	LOC105369274	A0A096LPK9	316 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms