RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SPHARQ15513 63 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GDPGP1Q6ZNW5 385 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TRIM69Q86WT6 500 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GALNT11Q8NCW6 608 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SUN3Q8TAQ9 357 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RSC1A1Q92681 617 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF681Q96N22 645 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 EVA1AQ9H8M9 152 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MRPS30Q9NP92 439 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KLHL1Q9NR64 748 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MGAT4AQ9UM21 535 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 YBX2Q9Y2T7 364 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DOCK8Q8NF50 2099 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C5orf58C9J3I9 102 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 STATHP02808 62 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LAMP2P13473 410 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DDOSTP39656 456 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RNF144AP50876 292 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC16A1P53985 500 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.782e-7■■■■■ 29.7
SENP3-EIF4A1-201ENST00000614237 SEC23BQ15437 767 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GPR19Q15760 415 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 STK11Q15831 433 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 YIF1BQ5BJH7 314 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC48A1Q6P1K1 146 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C1orf94Q6P1W5 598 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CASP12Q6UXS9 341 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 VWA5B2Q8N398 1253 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR52E1Q8NGJ3 308 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FLVCR1-AS1Q8TAF5 88 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CEP76Q8TAP6 659 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PMM1Q92871 262 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TEX10Q9NXF1 929 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C5AR2Q9P296 337 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LIPT1Q9Y234 373 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CD8B2A6NJW9 211 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PROM1O43490 865 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NME6O75414 186 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SERPINI2O75830 405 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PCDH8O95206 1070 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CD8BP10966 210 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NTSR1P30989 418 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MAP2K3P46734 347 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ADPRHP54922 357 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TIMM50Q3ZCQ8 353 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LCN1P1Q5VSP4 162 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HEPHL1Q6MZM0 1159 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PAQR7Q86WK9 346 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KRT73Q86Y46 540 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SAMD14Q8IZD0 417 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FAM26EQ8N5C1 309 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR4M1Q8NGD0 313 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF431Q8TF32 576 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 AKAP1Q92667 903 aaKnown RBP eCLIP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MRPL38Q96DV4 380 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MYADMQ96S97 322 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ARHGDIGQ99819 225 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TREX2Q9BQ50 279 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PRR14Q9BWN1 585 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC7A5P2Q9GIP4 190 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ABCG4Q9H172 646 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLA2Q9H6Q3 261 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CALML5Q9NZT1 146 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 EIF3KQ9UBQ5 218 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LSM2Q9Y333 95 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 VCANP13611 3396 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FEZF1A0PJY2 475 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CHURC1-FNTBB4DL54 471 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ANHXE9PGG2 379 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SMAD9O15198 467 aaKnown RBP10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 H1F0P07305 194 aaKnown RBP10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 F3P13726 295 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CMPK1P30085 196 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RPS15AP62244 130 aaKnown RBP10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SGCGQ13326 291 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CNIH2Q6PI25 160 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SIMC1Q8NDZ2 872 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TOR1AIP2Q8NFQ8 470 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC35G5Q96KT7 338 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZFP3Q96NJ6 502 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MS4A7Q9GZW8 240 aaPredicted RBP10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NANSQ9NR45 359 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TICRRQ7Z2Z1 1910 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A0A0G2JN53 185 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A0A1W2PP55 124 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A6NCN8 305 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 INMT-MINDY4F8WBC2 141 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GTPBP1O00178 669 aaKnown RBP10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HRO43593 1189 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RNGTTO60942 597 aaKnown RBP10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 BCHEP06276 602 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GAAP10253 952 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DRD5P21918 477 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PSMB5P28074 263 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NTSP30990 170 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TGM3Q08188 693 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MANEAQ5SRI9 462 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DCST1Q5T197 706 aa10.16□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PLAG1Q6DJT9 500 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms