RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 CCND3P30281 292 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-217ENST00000608425 ADRA1AP35348 466 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 C2orf68Q2NKX9 166 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 MINDY4Q4G0A6 757 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 H3F3CQ6NXT2 135 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 C3orf33Q6P1S2 294 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 ESPNLQ6ZVH7 1005 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 RHOUQ7L0Q8 258 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 SSX6Q7RTT6 188 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 PLA2G15Q8NCC3 412 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 DBF4BQ8NFT6 615 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 ART5Q96L15 291 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 OR4K3Q96R72 315 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 GSDMCQ9BYG8 508 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 PBX4Q9BYU1 374 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 RIMS4Q9H426 269 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-217ENST00000608425 CLMPQ9H6B4 373 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 REEP4Q9H6H4 257 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 ACSS1Q9NUB1 689 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-217ENST00000608425 COLCA2A8K830 154 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 TMEM189-UBE2V1I3L0A0 370 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 PRAMEF2O60811 474 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 PEX11BO96011 259 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 TACR1P25103 407 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 CHI3L1P36222 383 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-217ENST00000608425 UBE2MP61081 183 aaKnown RBP11.18□□□□□ -0.62
CTCFL-217ENST00000608425 DHODHQ02127 395 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 ATP13A5Q4VNC0 1218 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 PRSS45Q7RTY3 260 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 TMEM17Q86X19 198 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 KLHDC8BQ8IXV7 354 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 TCEANCQ8N8B7 351 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 AQP11Q8NBQ7 271 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 NEIL3Q8TAT5 605 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 EDEM1Q92611 657 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
CTCFL-217ENST00000608425 FTSJ1Q9UET6 329 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 WASF3Q9UPY6 502 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 NOD1Q9Y239 953 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 DLGAP4Q9Y2H0 992 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 CCL27Q9Y4X3 112 aa11.18□□□□□ -0.62
CTCFL-217ENST00000608425 CCDC88CQ9P219 2028 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 IFRD1O00458 451 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 IRAK2O43187 625 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 EOMESO95936 686 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 ELAVL2Q12926 359 aaKnown RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 BOP1Q14137 746 aaKnown RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 PYY3Q5JQD4 70 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 IQCF1Q8N6M8 205 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 OR1S2Q8NGQ3 325 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 RHEBL1Q8TAI7 183 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 GCDHQ92947 438 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 TCEAL4Q96EI5 215 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 SUCNR1Q9BXA5 334 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 DNAJB11Q9UBS4 358 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 ZAR1LA6NP61 321 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 ANHXE9PGG2 379 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 TLR4O00206 839 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 RNF144AP50876 292 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 MISPQ8IVT2 679 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 CCDC117Q8IWD4 279 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-217ENST00000608425 OR52B4Q8NGK2 314 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 OR4C15Q8NGM1 316 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 KAT2AQ92830 837 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 SCLYQ96I15 445 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 PRO1933Q9H354 126 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 PPT2Q9UMR5 302 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 GSTK1Q9Y2Q3 226 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 BACE2Q9Y5Z0 518 aa11.17□□□□□ -0.62
CTCFL-217ENST00000608425 TMEM88BA6NKF7 163 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 CLIC1O00299 241 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 CACNB4O00305 520 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-217ENST00000608425 RFXANKO14593 260 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 FGF10O15520 208 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-217ENST00000608425 HLA-DQB2P05538 268 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 PIRTP0C851 137 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 ZNF35P13682 527 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 NOS3P29474 1203 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 SLC11A2P49281 568 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 CRISP1P54107 249 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 EPHA4P54764 986 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 MAXP61244 160 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 ZNF155Q12901 538 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-217ENST00000608425 NCF4Q15080 339 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 CCDC157Q569K6 752 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 CARFQ8N187 725 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 AVL9Q8NBF6 648 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 OR52I1Q8NGK6 324 aa11.16□□□□□ -0.62
CTCFL-217ENST00000608425 ZC3H10Q96K80 434 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms