RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 EVI2BP34910 448 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 RFX3P48380 749 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 MASP1P48740 699 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 MEOX1P50221 254 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 CRISP3P54108 245 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ATP12AP54707 1039 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 RPS26P62854 115 aaKnown RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ALDH6A1Q02252 535 aaKnown RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 PLGLB1Q02325 96 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 RBBP4Q09028 425 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 C17orf67Q0P5P2 114 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 INPP5JQ15735 1006 aaPredicted RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ZSWIM7Q19AV6 140 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ZNF630Q2M218 657 aaPredicted RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 HYAL4Q2M3T9 481 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 GTDC1Q4AE62 458 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 FLYWCH1Q4VC44 716 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 GPAT3Q53EU6 434 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 KRTCAP3Q53RY4 240 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 GCNT6Q5T4J0 391 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 FIGNL1Q6PIW4 674 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 DLEU7Q6UYE1 221 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 HACD2Q6Y1H2 254 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 LRRC74BQ6ZQY2 392 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 WDR53Q7Z5U6 358 aaPredicted RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 SERPINA11Q86U17 422 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 SLC22A16Q86VW1 577 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 SLC30A8Q8IWU4 369 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 CLEC4FQ8N1N0 589 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 Q8NA96 180 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 OR2M7Q8NG81 312 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 RNF138Q8WVD3 245 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 FRMD6Q96NE9 622 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 BBC3Q96PG8 261 aaPredicted RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 NODALQ96S42 347 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 THUMPD3Q9BV44 507 aaKnown RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ZNF350Q9GZX5 532 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 TMEM38AQ9H6F2 299 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ZFP64Q9NPA5 681 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 A4GALTQ9NPC4 353 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 SLC25A37Q9NYZ2 338 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 MAP10Q9P2G4 905 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 SUCOQ9UBS9 1254 aaKnown RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 TAGLN3Q9UI15 199 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 WDR45Q9Y484 360 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 WIF1Q9Y5W5 379 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 ATMQ13315 3056 aa6.87□□□□□ -1.31
CUX2P1-201ENST00000606426 DOCK10Q96BY6 2186 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 A0A0G2JPF8 293 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 HNRNPCL2B2RXH8 293 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 HNRNPCL3B7ZW38 293 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 AIM2O14862 343 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 SNPHO15079 494 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 NDUFB5O43674 189 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 SLC28A2O43868 658 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 FADS1O60427 444 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 HNRNPCL1O60812 293 aaKnown RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 DNAJA2O60884 412 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 ICOSLGO75144 302 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 TRIM3O75382 744 aaPredicted RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 NME6O75414 186 aaPredicted RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 CBR3O75828 277 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 UNC5CO95185 931 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 OXSR1O95747 527 aaPredicted RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 HNRNPCL4P0DMR1 293 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 ETFAP13804 333 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 SLC6A2P23975 617 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 MSX1P28360 303 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 GCKP35557 465 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 DCTP40126 519 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 MVDP53602 400 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 GPR85P60893 370 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 GANABQ14697 944 aaKnown RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 ZNF141Q15928 474 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 CCNJQ5T5M9 372 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 PRAMEF20Q5VT98 475 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 NANOGP8Q6NSW7 305 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 ERICH5Q6P6B1 374 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 KRT73Q86Y46 540 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 MSRB3Q8IXL7 192 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 CMIPQ8IY22 773 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 PEX5LQ8IYB4 626 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 ZNF619Q8N2I2 560 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 ZNF843Q8N446 348 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 FAM109AQ8N4B1 249 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 OR1J4Q8NGS1 313 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 BBS10Q8TAM1 723 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 CPT1CQ8TCG5 803 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 PNPT1Q8TCS8 783 aaKnown RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 GRHL3Q8TE85 626 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 FAR1Q8WVX9 515 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 RCN3Q96D15 328 aa6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 SNRNP40Q96DI7 357 aaKnown RBP6.86□□□□□ -1.31
CUX2P1-201ENST00000606426 OTUB1Q96FW1 271 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms